AMCG00001577


Basic Information

Item Value
gene id AMCG00001577
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7922768 ~ 7923494 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001577
ATGACGGCAGGCTCCATAGTTGCCCCACAGATTATTCCCATCAGAGTTCCCCTGCCTGGCAAATCCAAGAACCAGATAGACACCAGCACACCTGTGGAGATCAAGTCAGACACGCCAGATGTCAGCATTTACTTTACCCTGGACGGCAGTAAACCAGAGGTGGTGAAGAAACCGGGGTCCAGAGAGAACAGCACATTGAAATACAGAGGACCAATAACATTACCCGAGGGGAAGGTTTCTGTGAAAGCATTTGCTATCACCAGGGATGGCAGAGAGAGTGCGGTGGTCACCAAATTTTTCCTGGTGGAGTTTGTTCCATCGTCCGAGCTGGCCTCAGGTGATGAGGACGAGGACAACTTTCTGGAAGATTACAAACGAGACATGGCCCGACAGGCAAGCCCGCCTCCATCCGTGCAGACTTTTGGAACAGAAAACTGa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001577 True 438 mRNA 0.51 3 7922768 7923494

Neighbor

gene id symbol gene type direction distance location
AMCG00001574 NA coding upstream 5442 7909198 ~ 7917326 (+)
AMCG00001572 smek2,ppp4r3b coding upstream 26796 7882716 ~ 7895972 (+)
AMCG00001573 pnpt1,LOC106607983 coding upstream 41410 7871153 ~ 7881358 (+)
AMCG00001571 NA coding upstream 63353 7854144 ~ 7859415 (+)
AMCG00001556 LOC104967701 coding upstream 129888 7774842 ~ 7792880 (+)
AMCG00001576 NA coding downstream 32 7923526 ~ 7928887 (+)
AMCG00001575 snx5,LOC106611592 coding downstream 16640 7940134 ~ 7962377 (+)
AMCG00001567 rrbp1 coding downstream 52593 7976087 ~ 7995881 (+)
AMCG00001568 NA coding downstream 82941 8006435 ~ 8017420 (+)
AMCG00001591 LOC106565008,LOC103477211,LOC107375568,LOC106929419,LOC107676389 coding downstream 129989 8053483 ~ 8094300 (+)
G158713 NA non-coding upstream 21415 7899443 ~ 7901353 (+)
G158677 NA non-coding upstream 169998 7752402 ~ 7752770 (+)
G158675 NA non-coding upstream 178735 7743558 ~ 7744033 (+)
G158673 NA non-coding upstream 181712 7740626 ~ 7741056 (+)
G158671 NA non-coding upstream 187158 7735276 ~ 7735610 (+)
G158726 NA non-coding downstream 10164 7933658 ~ 7933858 (+)
G158727 NA non-coding downstream 10479 7933973 ~ 7934875 (+)
G158728 NA non-coding downstream 11580 7935074 ~ 7935289 (+)
G158729 NA non-coding downstream 12778 7936272 ~ 7936478 (+)
G158771 NA non-coding downstream 74416 7997910 ~ 7999712 (+)
G158676 NA other upstream 175788 7746681 ~ 7746980 (+)
G158672 NA other upstream 184878 7736515 ~ 7737890 (+)
AMCG00001550 NA other upstream 242985 7671314 ~ 7679783 (+)
G158537 NA other upstream 894627 7023388 ~ 7028141 (+)
G158478 NA other upstream 1046190 6874768 ~ 6876578 (+)
G158725 kat14,LOC106584902 other downstream 9662 7933156 ~ 7933555 (+)
G158836 NA other downstream 235652 8159146 ~ 8161815 (+)
G159174 NA other downstream 1989814 9913308 ~ 9914664 (+)
AMCG00001630 NA other downstream 2234240 10157734 ~ 10159826 (+)
AMCG00001643 spred2 other downstream 2731693 10655187 ~ 10677854 (+)

Expression


Co-expression Network