AMCG00001626


Basic Information

Item Value
gene id AMCG00001626
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 9236411 ~ 9247003 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001626
AGCTGTTTCACTTTCTCTGAGTTTCCCCACACACTCGCAGTGAGCCTGGGGCTGATCAACGCCAAAAACAACACTCACAAGCCCCACCAGCACGGCAACatgagcaaaaagaaaaaggactgGAAGGTGGAGAAAGAGCGTTTGCTGGGTCTGGGACTGGAAGAGCGGCGCAAAGATTATAGAGGCAACCATGTCCCGCTGGAGAAAATCCCCACCTGGAGGAAGCAGGAGAGAAGTAAATctaAAGATGATGTGGACGAGTCTGAGGTGCGGCCAGTCAGTCTGAGTGACCGCGTGTCTCTGTACAAAGGGGACATCACCATCTTGGAGATTGACGCCATTGTGAATGCTGGTAGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001626 True 360 mRNA 0.52 3 9236411 9247003

Neighbor

gene id symbol gene type direction distance location
AMCG00001618 ndufaf5 coding upstream 6413 9218629 ~ 9229998 (+)
AMCG00001616 ism1,LOC107662810,LOC103134171,LOC103134168 coding upstream 81395 9150017 ~ 9155016 (+)
AMCG00001617 LOC107600566,LOC107654988,LOC107662809 coding upstream 101048 9093769 ~ 9135363 (+)
AMCG00001613 btbd3 coding upstream 207617 9017866 ~ 9028794 (+)
AMCG00001614 NA coding upstream 269673 8947413 ~ 8966738 (+)
AMCG00001634 snrpb2,LOC107684252 coding downstream 720412 9967415 ~ 9970362 (+)
AMCG00001635 NA coding downstream 724350 9971353 ~ 9972980 (+)
AMCG00001633 pcsk2,LOC107699156,LOC106607177 coding downstream 767220 10014223 ~ 10050694 (+)
AMCG00001631 LOC103355666,LOC100697573,LOC101465959,LOC102795325,LOC106577087,LOC108243857 coding downstream 848357 10095360 ~ 10097803 (+)
AMCG00001632 LOC107580235 coding downstream 927129 10174132 ~ 10177898 (+)
G159101 NA non-coding upstream 22064 9210120 ~ 9214347 (+)
G159041 NA non-coding upstream 458666 8776937 ~ 8777745 (+)
G158857 NA non-coding upstream 931571 8302550 ~ 8304840 (+)
G158837 NA non-coding upstream 979222 8165773 ~ 8257189 (+)
G158823 mrpl14 non-coding upstream 1133996 8101451 ~ 8102415 (+)
G159142 NA non-coding downstream 69108 9316111 ~ 9369910 (+)
G159170 NA non-coding downstream 615957 9862960 ~ 9863228 (+)
G159169 NA non-coding downstream 622165 9869168 ~ 9869603 (+)
G159204 NA non-coding downstream 822927 10069930 ~ 10070334 (+)
G159250 NA non-coding downstream 1068058 10315061 ~ 10319144 (+)
G158836 NA other upstream 1074596 8159146 ~ 8161815 (+)
G158725 kat14,LOC106584902 other upstream 1302856 7933156 ~ 7933555 (+)
G158676 NA other upstream 1489431 7746681 ~ 7746980 (+)
G158672 NA other upstream 1498521 7736515 ~ 7737890 (+)
AMCG00001550 NA other upstream 1556628 7671314 ~ 7679783 (+)
G159174 NA other downstream 666305 9913308 ~ 9914664 (+)
AMCG00001630 NA other downstream 910731 10157734 ~ 10159826 (+)
AMCG00001643 spred2 other downstream 1408184 10655187 ~ 10677854 (+)
AMCG00001645 NA other downstream 1500486 10747489 ~ 10757858 (+)
AMCG00001691 NA other downstream 3082976 12329979 ~ 12333700 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G195915 NA non-coding NC_053130.1 CM020927.1 22635738 ~ 22640924 (+)