AMCG00001715


Basic Information

Item Value
gene id AMCG00001715
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 13823609 ~ 13908970 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001715
ATGAGTCATGTGTCGCTGGTGGCAGGGGTGCTCTGTATCCTGGGGCCCCTGGGGCGCCCCGTGCCCTCGGTGCCGGCACACCTCGGGCAGATGGTGGGACAGGTAATGATGCTCGGgtTGCCCCTAAACCCTAATGCTTTACAGGACCAAAACAAGCATGCCATTAACACGCAACAGTACGACTTCAAATTTGCTTTGTGTATGCTGATGGGCACAAAAGCAGTAGCCCTGCACTGGGAGAAAATTAAGGATGAAGCAGTGAAACTCAACTCGGCTCTTCTCCTGGTGGATCTGGCCACCTTAGCTGCTGAGGAGCTGCTAGTCCCCGCCCCTTTAGCAGGCGATTGGCTAGATCAGGCGACAGGACGCaggGATTTACAAAGATCCTCTGCAAAAATCCTAAATGGGCAGCTGAAAATGGATCCAGTGATAGTTGTCCACGGGGGTGCCTGGGCCATTCCAGATCAGATCTCAGAGGCCAGTGTGAAAGGGGTGAAGACCGCAGCCTCAGAGGGGTTCGCCGTACTCAAGAAGAGGGGAAGTGCGCTCAACGCCGTTGAATTGGCCGTGAGAGCCATGGAAGATAACCCAGTGTTTGACGCGGGTCATGGCGCTGTGTTGGACGCTGATGGTGAAGTGGAGCTGGACGCGATCATCATGGATGGCAAAACGCTCGCTGCTGGAGCCGTCTCTTCCATCAGGAACATTTCCAATCCGGTGACATTCGCCCGCTCAGTCATGGAGAAGACGGACCATGTCATGCTTACTGACAGAGGAGCTAACCTGTTTGCTGACGGCCTTGGCATACCCAAACTGGCCACTGAGACACTggtcacagaaaatgaaaggaagGAGTGGGAGCACTATCAGAAGTATGCCCAAGGAGTGAAGGAGCTATTTAATGCACAGGATCATGACACCGTAGGCGCTGTGGCTGTGGACTGCGATGGGAACGTAGCCTGTGCCACTTCCACAGGAGGGATCAGAAATAAAATGGTTGGAAGGGTGGGAGATTCACCCATTATCGGCTCCGGCGGGTATGCAGACAATCACAGTGGAGCAGTGTCTTGTACCGGCCATGGAGAGTCCATTATGAAAGTGACGCTGGCGAGACTGATTCTCTTCCACATGGAACAAGGCAAAGCTGCAGATCAGGCTGCTGAAGTATCCCTCCAATACATGGGGGAGAGGGTCCATGGCGGAGGAGGAGCCATTGTTGTGAGCAACAAAGGGGATTGGGCTGCAAAATTTACCACTGAACGAATGGCCTGGGCATCTGTAAAGGAGGATATAATGTCTTATGGTTTAAACCCTAAGGAGATATTTTCTGAACACATTCAGGATTAAATTCATATATCACATAATCGGATGACTACAAAAATGTATAGCATACTCTGTATACATATgactcaacacaacacaacagtatCACAACACATATGGCAGATTAGTGTGTGCTTGATTTGAGCATCATAAGGTTGTGTACCATGCagccaaacacacaacaaagtgAGAATACTCTGAATTCTGAAAACACAcgtataatgtttttaaatgtttttaactgTTATACCaatataaatgacaatatatttaaaaagtaatattatatatttatataattggcTCCATTATATGCGgtcaattaatttataatgtacgGAGGTTAACGACAAAGTAATTAAATTCTATTGTTGGTAGAAACATATGTTTGCTGCTAGTTTGTGCCAGTGAAAAATTCAGTATATAAGCAGCAAATGATTATCAGAAATCTGTGCGGAAACATATTGACTTCAAGGGGGCGTTAATCCCATTCCAATTAAAACATGCCTCAAATG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13051 ASRGL1, iaaA; L-asparaginase / beta-aspartyl-peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001715 True 1838 mRNA 0.47 11 13823609 13908970

Neighbor

gene id symbol gene type direction distance location
AMCG00001722 ptp4a1 coding downstream 18704 13798387 ~ 13804905 (-)
AMCG00001721 NA coding downstream 27544 13779284 ~ 13796065 (-)
AMCG00001714 NA coding downstream 413098 13409477 ~ 13410511 (-)
AMCG00001713 adgrb3 coding downstream 498589 13323898 ~ 13325020 (-)
AMCG00001711 NA coding downstream 550854 13238506 ~ 13272755 (-)
AMCG00001727 prim2,LOC107743543,LOC107725490,LOC107676604,LOC102784181,LOC108443732,LOC108263846 coding upstream 69643 13978613 ~ 13985327 (-)
AMCG00001728 NA coding upstream 129900 14038870 ~ 14041180 (-)
AMCG00001726 NA coding upstream 148706 14057676 ~ 14059726 (-)
AMCG00001729 NA coding upstream 151263 14060233 ~ 14069875 (-)
AMCG00001744 NA coding upstream 431788 14340758 ~ 14343171 (-)
G159904 NA non-coding downstream 72520 13750880 ~ 13751089 (-)
G159818 NA non-coding downstream 1030048 12787082 ~ 12793561 (-)
G159748 NA non-coding downstream 1308531 12513392 ~ 12515078 (-)
G159747 NA non-coding downstream 1310705 12512352 ~ 12512904 (-)
G159746 NA non-coding downstream 1311330 12511622 ~ 12512279 (-)
G159995 NA non-coding upstream 266771 14175741 ~ 14203768 (-)
G160025 NA non-coding upstream 358417 14267387 ~ 14267741 (-)
G160040 NA non-coding upstream 402171 14311141 ~ 14316143 (-)
G160080 NA non-coding upstream 511967 14420937 ~ 14517285 (-)
G160085 NA non-coding upstream 565272 14474242 ~ 14480359 (-)
AMCG00001710 NA other downstream 718185 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 846583 12942361 ~ 12977026 (-)
AMCG00001702 NA other downstream 886366 12931231 ~ 12937243 (-)
G159303 NA other downstream 3152368 10670437 ~ 10671241 (-)
AMCG00001628 NA other downstream 3601891 10212874 ~ 10221718 (-)
G159976 NA other upstream 238658 14147628 ~ 14151555 (-)
AMCG00001733 NA other upstream 554760 14463730 ~ 14473159 (-)
AMCG00001756 NA other upstream 641719 14550689 ~ 14570927 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 1590583 15499553 ~ 15501793 (-)
G160255 NA other upstream 1595341 15504311 ~ 15520639 (-)

Expression


Co-expression Network