AMCG00001718


Basic Information

Item Value
gene id AMCG00001718
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 13592191 ~ 13602628 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001718
ATGTGTGTGCCCCCCAGTGAATGTGGGACCGCTAAGGCACAAGGGAATGTGAACTTGAGCCAGTTTTTCCCCGTGCCCAATATGAAAGAGCACGAAAGCCAGAAACCGTTCTTCCACCTGACCTCAGAGATGGCGAACCACCCAGCAGCTCTGAACAACACGCAGAGCTGTTTCTCAGTGTACCGCAGCCTGTTGTGTTATGGATTTTCCGGAGCTAACTGTGAAGTGGATATAAATGTTTGTGGATTACTGAACACCAGCTGCCCCCCTGGTTCCCTGTGTCTGGACCTGCCAATTGGACTGCAGTACACGTGTCGGTTGCCATGCCCTGAGCACACGATGCCATGTGCAAATGGGGGCCGTTGTTTCCTCAGCGATGTTGACAGCTACGATTGTGTCTGCGCACCTGGATGGACTGGACCCAACTGCCtggaaaacataaatgaatgtGAACATCACTGGTGTCAAAATGGAGCTACCTGTGAAGATGGCATCAATGGCTACAGGTGCGTGTCTTGTGTACTAGGTTTTATCAATTCTAAAACCAAAAGGATAACTCATACCTCTTTTTTAGCATCTTGGAATCCCAGAAAAGATATAGAGTTGAGAATGTGCCAGAGAGTTAAATGGAGAAATGTTCTTTCCTGTTACAAGTTGATgtgtatttgtcctcttggcTTTACTGGAACATCCTGTGAATTTGATATCGATCACTGCGTCAGCAACCTCTGCTCAAACCACAGCACTTGTCTGGACCTGCGCTACAATTACACCTGCCGTTGCATGCTGGGATATGAAGGGCGATACTGTGAAATAGAGACGAATGAGTGCGACAGTTTGCCATGTAAAAACGGGGCCACCTGTGTGGACTTAATTGGCGATTTCGTATGTCACTGTGCGGTTGGTTTTGAAGggaGAACATGCTCTGAAAATGCTGATGACTGTTGGTCTAGGCCTTGTCTTAATGGGGGGACCTGTGTGGATCTTATCAATGACTACAGATGCCTTTGTCCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001718 True 1017 mRNA 0.48 6 13592191 13602628

Neighbor

gene id symbol gene type direction distance location
AMCG00001709 lmbrd1 coding upstream 441935 13141097 ~ 13150256 (+)
AMCG00001708 col9a1 coding upstream 580402 12984899 ~ 13011789 (+)
AMCG00001699 b3gat2 coding upstream 739468 12844164 ~ 12852723 (+)
AMCG00001698 NA coding upstream 799360 12787082 ~ 12792831 (+)
AMCG00001695 NA coding upstream 1065796 12521489 ~ 12526395 (+)
AMCG00001717 NA coding downstream 15666 13618294 ~ 13661682 (+)
AMCG00001723 NA coding downstream 59153 13661781 ~ 13667350 (+)
AMCG00001719 NA coding downstream 69953 13672581 ~ 13674756 (+)
AMCG00001720 NA coding downstream 94128 13696756 ~ 13702729 (+)
AMCG00001716 NA coding downstream 146283 13748911 ~ 13778516 (+)
G159798 NA non-coding upstream 715505 12785795 ~ 12876686 (+)
G159800 NA non-coding upstream 781456 12799509 ~ 12810735 (+)
G159775 LOC102207824,LOC102800191,LOC107693914 non-coding upstream 912702 12676811 ~ 12679489 (+)
G159594 NA non-coding upstream 1944739 11625671 ~ 11647452 (+)
G159483 NA non-coding upstream 2152579 11436662 ~ 11439612 (+)
G160024 NA non-coding downstream 664760 14267388 ~ 14267722 (+)
G160036 NA non-coding downstream 703397 14306025 ~ 14306260 (+)
G160107 NA non-coding downstream 923109 14525737 ~ 14526508 (+)
G160116 NA non-coding downstream 956138 14558766 ~ 14563369 (+)
G160129 NA non-coding downstream 1026675 14629303 ~ 14632490 (+)
AMCG00001691 NA other upstream 1258491 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 2834333 10747489 ~ 10757858 (+)
AMCG00001643 spred2 other upstream 2914337 10655187 ~ 10677854 (+)
AMCG00001630 NA other upstream 3432365 10157734 ~ 10159826 (+)
G159174 NA other upstream 3677527 9913308 ~ 9914664 (+)
G160026 NA other downstream 666987 14269615 ~ 14270190 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other downstream 1728992 15331620 ~ 15334580 (+)
AMCG00001762 NA other downstream 1829709 15432337 ~ 15439031 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 2634634 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 3576966 17179594 ~ 17182601 (+)

Expression


Co-expression Network