AMCG00001724


Basic Information

Item Value
gene id AMCG00001724
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 13812017 ~ 13814732 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001724
GAAACACTGGAGAAGAACACTGATGAAGTGGATGGCAGTGGGGTTAGCCtgggaaagagaaaaggagTCAGAGTAAGTGGGAAGTACGTGCCCTCCATGGAGCAGGAGAGCGGGGAACCCCCTGTAATCTCGGCACCTTCCTACAGTAGCAGGAGGCAGTCGGATGCATCCCTCACGGTGGTGTACCCTCCGCTGCGAAAACCAGCCAGCTACCCACAGGTGAATGAGCAGCTTGGGAAAGGATACCAGCAGGAGGCCAGCAATCAAAGCAAAGAGAGACCCGAGGCGCTGCAAACAGATTGTGAGCCCAGCGACGACTGGCATAGGCAGGGCGGGGGGAGCAGGAGCCCAAGCTCAGATCCTGGAATCTCTAAACAAACTTTAGAGGAACTGAAAAACCTCTTGCGAGAGAGCTCTCTCCTGAGCCCCCGAGGCAAGGAAACCAGCAAGCCAGGCAGCGGGTACTCCTACTTACATGTAACAAAGCCCGAAGGCCGGCCAGATGAAGGACCAGTGAGGTCTTTCACAACCTTCAGACCTCTATCAGAGGACTCACAGAGAACACAGAAGGCAAGGGAAAGACTTTCTCCCCAGCCTAAATCCACCCTAGACACAACCAGTTCCAGCAGGCCTGAAAGTATCAATCTGAAACCAAGCAATTCAAGGCACACTACAGTTGATACTGGAAACAAAGGCAATTACACAACCATTTCTCAGACTGGCATCGAGCACATAAAGCAACAGATTGCAAGGGAGGAAATAAGTTTTGTCCGTTTTGAAGCAACGGACCTGCATGGAGTTTCAAGGTCCAAGACTGTTCCAGCGCGCTTCTTTCAGGAAAAAGCCATATATGGTGTCCCAATGCCAAGAAGCTACCTGGAACTTACCTTGAGCCCTAAAGACAATGAAGTAGACCATATCAGTGCTGCCAATTTCAACAGCGATGTCCTCCTCATCCCTGATCTTCTTACCTTCCGGATCCTCCCCTGGGCCGAAAAAACAGCCCGAGTGCTCTGTGACTCTTGCGCGGTCACAGGAAACCCACTGCGTACATCTCCTCGACATATAGCCAAACAGCTGCTCAATCAGCTTAAATCCATTGGCTTTTCTTTGCATTCATCCTTCACATACGAGTGCTGTATTTTTGGAGTCCCAGAGAAGATAAATTCAAAGACCCTGTTTTTTCCAGCTGCAACCTTGCTGAGCAACCACGACTTGCCATTCTTTCAGCAGCTCATTAATGGCATGTATTTCATGGGTGCCGATGTAGACAGCTTTGCTTCTGCTAGCGGTCCTGGACAAATGGAGATCTCTTTCCAGCCAGAGTTTGGCATCAACTCGGCTGACAATGCCTTTACTTTTAGAACGGGCATCAAAGAGATGGCCAAAAAGCATGGTTACATCGCAAGCTTCTTCACTGATGATGGGTTCTATAACTCGGGGGTGTTCTCCCACAGTCTGTGGGATGTCAACGGGAAGAAGAACCTCTTCCAGTCAGGGGGTGGTGAACTGTCCGAGTTTGGGAAGAAGTGGTTAGCCGGGCTGCTGCATCACTCAGCGGCACTCAGCTGTTTGATGGCACCAGGCGTTGGCTGTCGCCGCCAAATTGCTAAAGACATAAAGGAGCCCAAACACGTTGTTTATGTGACCTGGGGATCCAATGACAATAGCTGTGcctttaatgtaaaatatcatGGAGGAAAAGGTACACACATTGACAACAAGCTGGGCTCAGCTACAGCAAACCCATACCTTGTTCTGGCAGCTACAGTGGCGGCTGGCTTGGATGGCATCAAGAGGAATCTCACGCTCAATGGTGGTGTGAATGGATCACAGAACCAGGAGCTGTTGAGGCACTACCCTATTCCCTTAAAGCTTGAGGATGCCCTGGTCGCTCTGGGGGACGACCACATCATCAGAGGGGCATTGGGAGATGCCTTCATTCAGTATTTCATTGCTATGAAACGCTATGAGATAGAAACTAAAGAACTAGACgcagagagaaacaaatgctTGGAATATTTCATTTAG

Function

GO:      GO:0044699

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001724 True 2031 mRNA 0.50 3 13812017 13814732

Neighbor

gene id symbol gene type direction distance location
AMCG00001716 NA coding upstream 33501 13748911 ~ 13778516 (+)
AMCG00001720 NA coding upstream 109288 13696756 ~ 13702729 (+)
AMCG00001719 NA coding upstream 137261 13672581 ~ 13674756 (+)
AMCG00001723 NA coding upstream 144667 13661781 ~ 13667350 (+)
AMCG00001717 NA coding upstream 150335 13618294 ~ 13661682 (+)
AMCG00001730 LOC107676606,LOC107582007,LOC107725434,LOC107743545,LOC107666564 coding downstream 82329 13897061 ~ 13908985 (+)
AMCG00001725 rab23 coding downstream 228186 14042918 ~ 14057578 (+)
AMCG00001737 NA coding downstream 255012 14069744 ~ 14078581 (+)
AMCG00001739 dst coding downstream 265036 14079768 ~ 14203773 (+)
AMCG00001742 NA coding downstream 393310 14208042 ~ 14219802 (+)
G159798 NA non-coding upstream 935331 12785795 ~ 12876686 (+)
G159800 NA non-coding upstream 1001282 12799509 ~ 12810735 (+)
G159775 LOC102207824,LOC102800191,LOC107693914 non-coding upstream 1132528 12676811 ~ 12679489 (+)
G159594 NA non-coding upstream 2164565 11625671 ~ 11647452 (+)
G159483 NA non-coding upstream 2372405 11436662 ~ 11439612 (+)
G160024 NA non-coding downstream 452656 14267388 ~ 14267722 (+)
G160036 NA non-coding downstream 491293 14306025 ~ 14306260 (+)
G160107 NA non-coding downstream 711005 14525737 ~ 14526508 (+)
G160116 NA non-coding downstream 744034 14558766 ~ 14563369 (+)
G160129 NA non-coding downstream 814571 14629303 ~ 14632490 (+)
AMCG00001691 NA other upstream 1478317 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 3054159 10747489 ~ 10757858 (+)
AMCG00001643 spred2 other upstream 3134163 10655187 ~ 10677854 (+)
AMCG00001630 NA other upstream 3652191 10157734 ~ 10159826 (+)
G159174 NA other upstream 3897353 9913308 ~ 9914664 (+)
G160026 NA other downstream 454883 14269615 ~ 14270190 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other downstream 1516888 15331620 ~ 15334580 (+)
AMCG00001762 NA other downstream 1617605 15432337 ~ 15439031 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 2422530 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 3364862 17179594 ~ 17182601 (+)

Expression


Co-expression Network