AMCG00001728


Basic Information

Item Value
gene id AMCG00001728
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14038870 ~ 14041180 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001728
ATGCAGTTCAGTGGTAGAAGAAACAAGAAGCTCATACCAGACCATCATGCTGAGCTTTATGGACACTGCCTTCAGTTCTATGGACAGCCACCGGTGGAAAACATCTCCCTTGCTGAGTTTGAAACCTTTGCGGTTGAAAGGCTGAAACTCCTGAAGACGGTGGAGAATATTGGAGTGAGCTATGTGAAAATGTCTGACCCGTACAAGAAGAAGCTGGAGGATGAGCTGAAAAAACTGCACTTCCCTTACAGACCTGCAGCCGATGATTTGAAGTCACAAATTGTACCAACAGAGCACGAGAAGCGAAGAAAGGACCACATCTCCCACTTCATCCTTCGTCTTGCATACTGCCAGACAGAAGACCTAAGGCGTTGGTTCATACAGCAGGAGATGGATTTGTTTCGATATCGTTTTTCTGAACTGCAGTATTACagcaaagacaaagaaaaagagtTTCTCAAAGAAAATCATTTGCACTATGACACa

Function

GO:

id name namespace
GO:0006269 DNA replication, synthesis of RNA primer biological_process
GO:0003896 DNA primase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001728 True 486 mRNA 0.44 4 14038870 14041180

Neighbor

gene id symbol gene type direction distance location
AMCG00001727 prim2,LOC107743543,LOC107725490,LOC107676604,LOC102784181,LOC108443732,LOC108263846 coding downstream 53543 13978613 ~ 13985327 (-)
AMCG00001715 NA coding downstream 129900 13823609 ~ 13908970 (-)
AMCG00001722 ptp4a1 coding downstream 233965 13798387 ~ 13804905 (-)
AMCG00001721 NA coding downstream 242805 13779284 ~ 13796065 (-)
AMCG00001714 NA coding downstream 628359 13409477 ~ 13410511 (-)
AMCG00001726 NA coding upstream 16496 14057676 ~ 14059726 (-)
AMCG00001729 NA coding upstream 19053 14060233 ~ 14069875 (-)
AMCG00001744 NA coding upstream 299578 14340758 ~ 14343171 (-)
AMCG00001743 hcrtr2,LOC107699124,LOC107597943 coding upstream 306913 14348093 ~ 14359579 (-)
AMCG00001731 NA coding upstream 324267 14365447 ~ 14380677 (-)
G159904 NA non-coding downstream 287781 13750880 ~ 13751089 (-)
G159818 NA non-coding downstream 1245309 12787082 ~ 12793561 (-)
G159748 NA non-coding downstream 1523792 12513392 ~ 12515078 (-)
G159747 NA non-coding downstream 1525966 12512352 ~ 12512904 (-)
G159746 NA non-coding downstream 1526591 12511622 ~ 12512279 (-)
G159995 NA non-coding upstream 134561 14175741 ~ 14203768 (-)
G160025 NA non-coding upstream 226207 14267387 ~ 14267741 (-)
G160040 NA non-coding upstream 269961 14311141 ~ 14316143 (-)
G160080 NA non-coding upstream 379757 14420937 ~ 14517285 (-)
G160085 NA non-coding upstream 433062 14474242 ~ 14480359 (-)
AMCG00001710 NA other downstream 933446 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 1061844 12942361 ~ 12977026 (-)
AMCG00001702 NA other downstream 1101627 12931231 ~ 12937243 (-)
G159303 NA other downstream 3367629 10670437 ~ 10671241 (-)
AMCG00001628 NA other downstream 3817152 10212874 ~ 10221718 (-)
G159976 NA other upstream 106448 14147628 ~ 14151555 (-)
AMCG00001733 NA other upstream 422550 14463730 ~ 14473159 (-)
AMCG00001756 NA other upstream 509509 14550689 ~ 14570927 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 1458373 15499553 ~ 15501793 (-)
G160255 NA other upstream 1463131 15504311 ~ 15520639 (-)

Expression


Co-expression Network