AMCG00001735


Basic Information

Item Value
gene id AMCG00001735
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14425275 ~ 14431342 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001735
ATGTCAGACGTCCGCGGGGCGTCCCTCTCTGGAAAAGAGCGTTTGTACAGAGGCCATGCTCTCAGACTCTTCCCGGTAATTGACAGGGTCAGAGGGCATTGCTCTAGCCCCGAGCAAGAGGCAGAAGAGATCGAGGATCAGATTGAAGAAGAGCCAGTCAGGAATGCATCCTTGGCTATTCTGGATCCACATGCTGGGCACAAGAAACATAAACACCACAGAGGAGATTACAAGGAAAACCGGAGACTGTCAAGGCCCAGACCATCCTCTGGAGGCCAGAGCACTCACAGACAGCCCTTTCTTGTCCCAGCATGCTCTGCAGCTACAGAAAGCCGGGATCAAGGTGGGGTGACAGGGAAAGAGAAGGGCCCAGCCAACAAACCACTCACTTCTAAAGTGCCATTAAAGGTGAGGAAGGGATTCAGAAGCACTTCTCTGAAAGTGGTCTCTGCTCTGATTCAGCTGCAGATTAAAGTGTGCAGTCAGAGGGGAAGTCTTGGGATCAGTATTGCGGGAGGAAAAGGATCATCGCCTTACAAAGAAAATGATGAGGGTATCTTCATTTCACGAGTGTCTAAGGGGGGACCGGCAGAGAAGGCTGGGGTTCACAAAGGAGACCGTGTATTGGAGGTGAATGGTTTGAATATGCAACATGTCACCCATCATGAAGCTGTGAGTGCCCTGAGGCATGCTGGGAGTTGCATTAAGATGATGCTGCTGAGGGAGAGGACGCAGGGCTCCGAGAGTCCAGACCATGACGACTCCAGTGTGTCGGACACCGAGAGCATTAAAAACGGACAGCACGACAGCCAAGAGGTCTACGGGCACAACCACAGTGCGCAGGGTGTGGAGTCGGGGTCACAGTGCAGCCCGGCGGCGAGGAGAGGGACCATCGTCTGCAATGGGAACGGAGCGGGTCTTTCGGGGTCTGAGGATGACCTTAGAAGATCCACAAGTGATACAGAGGCTTCAATCACAAACCACACCCTTCCCACTGTGAAAAATACCATGACCATACCCCGCATTATCCTCACACATCCTTCTACCTCAGATGAAGATGTCGAACAGTTAATGCAAGACCCTGAGGACGAGGAACTTGATGAGCTAGGCTCCCCGGACAGTCCTAACTCTTCAGAGTGCTTAAACAGTGCTTTCTATCCCCCATAGCGgtacccccacacacaccctaCAGAAAGCATACATGCAGTGTTCATGATAAAAGTGCAGCATTATTTCCtttgagtctttttttttggatttGAATGTAGGTCAGCATAAGGAACTTAttcttatttaatgtatattcaaGAAAAGGGTTAAAAAGGGAACACAGTGTTTAGACCCATTTTCTGTGGTATTCTCCGAAGCAAAACATTGATACTAGACATCCTGACAGAATTCACAAAGCAGAGGAGGAGATGGGTTGAAAGGCTTTGCTGAAAATCAAGAGCTGTGAGAGGCTTGTTTTTTGCACCTTAAATCCTTTTAGCAGCGGAGTGTTATACTGACACTGTGAgctttttagaaaaatataaaacaattcagCCTGTGATGTTTTGgacttgaaaatatattaaatatgaataaagcGCTTCGGTCACAGCAGTCActttcaatacaaaacattacaagaTGATAAATGTAATAGTCTGAATAATAGCTGTATCCACTTTCTTGAACAATCTTGCTGTATTatatgaaatgcaatgaaaCGGGCCTTACTGAGCTTTGTATAATCTTCTATTCGGAAAATACAACAACTATCGTTGTTATATTGCCAAATATTTTGTTCCAATAAATGACTATATTGTTAAAAGCATGGGTATTTATTGAGTCTTCCCCTAAAtgctaaaaaatatttattttcaggttcTTTGAATTGATATGATATGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001735 True 1896 mRNA 0.45 7 14425275 14431342

Neighbor

gene id symbol gene type direction distance location
AMCG00001732 NA coding downstream 3785 14398535 ~ 14421490 (-)
AMCG00001731 NA coding downstream 44598 14365447 ~ 14380677 (-)
AMCG00001743 hcrtr2,LOC107699124,LOC107597943 coding downstream 65696 14348093 ~ 14359579 (-)
AMCG00001744 NA coding downstream 82104 14340758 ~ 14343171 (-)
AMCG00001729 NA coding downstream 355400 14060233 ~ 14069875 (-)
AMCG00001734 lrrc1 coding upstream 3964 14435306 ~ 14461055 (-)
AMCG00001752 fbx9,fbxo9 coding upstream 95167 14526509 ~ 14533785 (-)
AMCG00001754 agpat5,LOC107665182,LOC102777099,LOC107717842 coding upstream 142471 14573813 ~ 14598148 (-)
AMCG00001755 mcph1 coding upstream 192458 14623800 ~ 14637738 (-)
AMCG00001765 NA coding upstream 799030 15230372 ~ 15258616 (-)
G160040 NA non-coding downstream 109132 14311141 ~ 14316143 (-)
G160025 NA non-coding downstream 157534 14267387 ~ 14267741 (-)
G159995 NA non-coding downstream 221507 14175741 ~ 14203768 (-)
G159904 NA non-coding downstream 674186 13750880 ~ 13751089 (-)
G159818 NA non-coding downstream 1631714 12787082 ~ 12793561 (-)
G160085 NA non-coding upstream 42900 14474242 ~ 14480359 (-)
G160094 NA non-coding upstream 60556 14491898 ~ 14493649 (-)
G160132 NA non-coding upstream 127810 14559152 ~ 14563505 (-)
G160311 NA non-coding upstream 1163265 15594607 ~ 15595355 (-)
G160319 NA non-coding upstream 1172501 15603843 ~ 15610716 (-)
G159976 NA other downstream 273720 14147628 ~ 14151555 (-)
AMCG00001710 NA other downstream 1319851 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 1448249 12942361 ~ 12977026 (-)
AMCG00001702 NA other downstream 1488032 12931231 ~ 12937243 (-)
G159303 NA other downstream 3754034 10670437 ~ 10671241 (-)
AMCG00001733 NA other upstream 32388 14463730 ~ 14473159 (-)
AMCG00001756 NA other upstream 119347 14550689 ~ 14570927 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 1068211 15499553 ~ 15501793 (-)
G160255 NA other upstream 1072969 15504311 ~ 15520639 (-)
AMCG00001784 NA other upstream 1260227 15691569 ~ 15702500 (-)

Expression


Co-expression Network