AMCG00001744


Basic Information

Item Value
gene id AMCG00001744
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14340758 ~ 14343171 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001744
GTGAAAGCTGCAAAGTAAATGAATCCCATGACTGTAATATGACCATTCAGTACATGATGGACAGTCACCAAGAACTTAAAGGTTGTTTGTGCACAAATGATGATTCCTGCAATATTCTGAAAATGATTGCACcacactgtattaaaaaaacagACAATGGCCAGTGCGACACACCGGACATTCGCCACGCGTGTCTTTCAACATGGAGACAGCTACAGAGCACAGCGCTGGGGGACTGCAGCTGCGCAAAACGAGGAAGGAAAAAGTGCTTGAAAATATGGAGCACTCTCTACAATAACTCCTGCATACAAAATGCCCAGAGGTCTGTGGGATCATCAGACACAGAGATTCAACCGGAAAAGGACCCCACAGGCTTATGGGAATTAAGTGCCCTTGCAAAATACGAGCACAGAAGCTCGAGATCCTGTTCGGACGTGGCAAAGCTCTGCCTAGAAGACGAAATATGCAACAGAGAGTTGGTGCCCCATGTAAAAGCATGCTCTGAGAGTCTGAATCAGTGTAATGTCTCTCAGTGCCAAAGAGCAGTACAGCTGTTCTACGACAGTTTACCGAGCAATGTCGCGGAGATCCTAGTTTTCTGTGACTGCAGCCCTTCAGATGACAAATGCTTACAAGTACAGGGTCTCCTTCACAGCCAATTCTGCTCTGGACAACTGAGTCACACTCCAACGTGCCTGGAAGTGTTTGACATATGCATAGAAGATATCTTTTGCAGGCACAGATACAAGACTTTCCAGGATAAATGTTGGGGAGCTGGCAAACTGATCTGTGACGGTCATATGGGCGATGACTGTTCCAGTTATCTTGACGAACACTTGATGTTCAGTGGAGAGGATGCGTGCAAAGCAGCCTTCACGGGCACAATGGGAACAATCCTTCAACACCCCTGTACTTGTTATGGATTAGAAAACGCAgaggaattaaaatgcaaacagctTCATAATGTGTTACACAACAGATCGCACTTT

Function

GO: NA

KEGG:

id description
K24156 GFRAL; GDNF family receptor alpha-like

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001744 True 989 mRNA 0.46 5 14340758 14343171

Neighbor

gene id symbol gene type direction distance location
AMCG00001729 NA coding downstream 270883 14060233 ~ 14069875 (-)
AMCG00001726 NA coding downstream 281032 14057676 ~ 14059726 (-)
AMCG00001728 NA coding downstream 299578 14038870 ~ 14041180 (-)
AMCG00001727 prim2,LOC107743543,LOC107725490,LOC107676604,LOC102784181,LOC108443732,LOC108263846 coding downstream 355431 13978613 ~ 13985327 (-)
AMCG00001715 NA coding downstream 431788 13823609 ~ 13908970 (-)
AMCG00001743 hcrtr2,LOC107699124,LOC107597943 coding upstream 4922 14348093 ~ 14359579 (-)
AMCG00001731 NA coding upstream 22276 14365447 ~ 14380677 (-)
AMCG00001732 NA coding upstream 55364 14398535 ~ 14421490 (-)
AMCG00001735 NA coding upstream 82104 14425275 ~ 14431342 (-)
AMCG00001734 lrrc1 coding upstream 92135 14435306 ~ 14461055 (-)
G160040 NA non-coding downstream 24615 14311141 ~ 14316143 (-)
G160025 NA non-coding downstream 73017 14267387 ~ 14267741 (-)
G159995 NA non-coding downstream 136990 14175741 ~ 14203768 (-)
G159904 NA non-coding downstream 589669 13750880 ~ 13751089 (-)
G159818 NA non-coding downstream 1547197 12787082 ~ 12793561 (-)
G160080 NA non-coding upstream 77766 14420937 ~ 14517285 (-)
G160085 NA non-coding upstream 131071 14474242 ~ 14480359 (-)
G160094 NA non-coding upstream 148727 14491898 ~ 14493649 (-)
G160132 NA non-coding upstream 215981 14559152 ~ 14563505 (-)
G160311 NA non-coding upstream 1251436 15594607 ~ 15595355 (-)
G159976 NA other downstream 189203 14147628 ~ 14151555 (-)
AMCG00001710 NA other downstream 1235334 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 1363732 12942361 ~ 12977026 (-)
AMCG00001702 NA other downstream 1403515 12931231 ~ 12937243 (-)
G159303 NA other downstream 3669517 10670437 ~ 10671241 (-)
AMCG00001733 NA other upstream 120559 14463730 ~ 14473159 (-)
AMCG00001756 NA other upstream 207518 14550689 ~ 14570927 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 1156382 15499553 ~ 15501793 (-)
G160255 NA other upstream 1161140 15504311 ~ 15520639 (-)
AMCG00001784 NA other upstream 1348398 15691569 ~ 15702500 (-)

Expression


Co-expression Network