AMCG00001765


Basic Information

Item Value
gene id AMCG00001765
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 15230372 ~ 15258616 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001765
ttttagttttcatcaGCAAGTGACTCCCAGCGGGCTGAGCTGATCTCCACTCTGCTCTGCAATCCTTTATTCTCTCTGGCAGGTCTGCTGAGGTTTGTCCACGATGGCGACAAGGGTTGTACCATTTTACCAGAAGAAGCACAAGCATTTTGACCAGGATTACCGCAGCAGTCAAACCAGATATGTGGTCCAAGAGTATTCGACCTCAAGGGCTTCTAAGTCAAGGCTAAGTGCCCATTCCAAACGGCATCAAGCTGCAGAGGAGGCAGAATCAACCTACACTGTGCCACCTTTTAGGACCAGGTCTGCAGAGAATCAAGAAGAGTACCAGCGCACAGTGGTCCATTTCAGCAATGAGTTGTCCGTTTTGGAGAATGAGATTCACCAGGCTAGACACGCCACTCGACAACAAGTGGACAAGCTCTCTGTCCAAAGAATAGTACAGGAGAAGATGGCACGGGAGAGGCACATTCACGAGCTGTCAATGGTCCGTGCGCCTGAATTTCTTGTGAGACTGAGATCTCACACTGTCTGGGAAAAGACTCCAGTGAAGCTCTTCTGCACTGTTGATGGATACCCCAACCCTGTGGTGAAATGGTATAAAGATGATGTCATCATTGATACGGTGAGTGTCCCGGGAAAGTACAGAGTGGAGGACAAGTATGGAGTCCACAGCCTGGAAATCTACAGGTGTGACATTCACGATACCGCTCAGTACACCGCAGTGGTGACTAACAGCCACGGACAGGCCACATCCGCGGCTGCTGTCATAGTGAAGAAGTTCAGAGGGGAGGACGAGCCCTATCACTCGGTGTTGCTCCCGATTCAGATCCCTCTGATGCCTGACATCCATTTCACTAAGATTGACATCTCCTTCCTGGACAAGTTTGATGTGACCTTTGGGACTGAAGGAGAAACTCTCAGTCTTGTTTGTAAGATGGTTATTACACCCGACCTGGCCAACCTGCAGCCTGACGCCCAGTGGTACCGAGATGATGTTCGTATCAAGGAATCCCAGTGGGCTGAGATTAAGTGTGGGGGCGGGATGGCCAGGCTGACCCTGACGCACCTGAACAAGGACGACGAGGGCTTGTACACCTTGCGCATGGTCACTAGAGGAGGAACCACCGAGCACAGCGCGTACATCTTCGTCAGTGATGCCCCGGTTTCAGTCACCGGAGCGCCAGGAGCCCCCATGGATATAAAAATCCACGATGCCAACAGAGATTATGTCATTGTATGTGAAGTCGGGACTGAAAACTGGATTCAGTGCAACGATTCCCCCATTAAAATCTGCAAATACCCCGTGCACGGTTTGTTTGAAGGCCACTCTTACATCTTCCGCGTCAGGGCCGTGAACAAGTCTGGGGTCAGCCGGCCTTCCAGGGTGTCCAATGCCATCGCTGCCctggatcctgcagatctggagAGACTGCAAGTCATTCAGCTGGAGAGAGGGAAACAAATTGTGATCTATCAGGACGACCTTGAAGGTGATGTAAAGATCCCTGGACCTCCCACCAACGTGCACGCATCAGAGACAAACCGAACATATGTTGTGCTCAGCTGGGAGCCGCCTGTTCCTCGCGGTAGAGAGCCCTTGATGTACTACATTGAGAAGGCCCCAGCAACTGGAGGAAACTGGCAAAGGGTGAACACCCAGATCCCTGTGAGATCTCCACGATACGCCGTCTTTGACCTGTCAGAAGGAACCTGCTACATTTTCCGTGTGTTGTCTGTAAACAAGCATGGAGTCAGCGATCCCTCCGAACCTACCGGACCCATTAAAACCCAGGAGCTGCGTAGTGTTCCTTCTGCTCCTGGTTGCATACTGGCCACAAGAAACACTAAGACATCTGTTGTTGTCCAGTGGGATCCACCCAAACAAGCTGCTGGTCTTATTGGCTATTACATTGACTCCAGTGTGACAGGGTCAAAGCAGTGGAACCCGTGCAACCACAAACCCTACAAACACACCAGGTTTGTTGTCCACGGCTTGACTACAGGACAGAGCTATGTTTTCCGTGTGAAAGCGGTCAATGCTCTGGGCTTCAGCGAGGATTCCCAAGAGTCGACCCCCATCGTGGTACAAGCTGCGCTCACAAGCCCTTCTCCACCCTATGGCATCACTCTCCTGTACTGTGATGGCCAATCGATGACCCTGGGCTGGAAGCACCCAAAGTTCTCTGGTGGAGCAAAGATCACGGACTATTACATCGATCAGCGCGAGGTGTCTGAATTGCGCTGGAGGGAGACCAATGTGCACTCCATCAAAGAGAGGATTTACAAGGTGGAAAACCTGAAGCAAGGCTCCTTTTATGAGTTTAAAATTCATGCTGGAAATCTGGCTGGAGTTGGGCTGCCCTCTGATGCCAGTGACCACTACAAATGTGAGGCCTGGACCATGTCAGAACCAGGACCGCCCTATGATCTGACTTTCTGTGAGGTCAGAAATTCATCTCTGGTTATTCAGTGGAAAGACCCTGTATACAACGGCCAAAGTGCAGTGACTGGGTACTATGTGGATAAGTTAAAAGTGGGTTCAGAAGAATGGACTACAGTGAATGAAAAAGCCATTTCTCACCGTTATCTAAAGGTTACAAATCTGGAAGAAGGCAGTTCCTATGTGTTCAGAGTGCGTGCCGTCAACGCTGCTGGAATTGGAAAGGCATCTGATAGCTCTGAATCGGTTCTCATCCAGGCAAGACCagATACAAAGGAGGTTTCTTCCGGAGTGGATGAAGAAGGCAACATTTACCTCAAGTTTGAGTGTAACGAAATGACTGATATTTCTCAGTTTGTTTGGTCTAAGTGCTATGAAGAAATTACTGACTTTTCCAGGGTGGCTATTGAAACGGAAGGAACCTCGATTGTTTTCAAGCAGCCCGACAAAGAGGATTTGGGAACCTTTTCTGTTGCCGTCACTGATACTGAAGGCGTCTCTGCAAGCTACGTCCTACAAGAGACCGaACTGGAAAAACTGATGGCACTCAGCTATGAAATAAGAAACCCATTGATTCCTCTCAAAACTGAGCTGTCCTACGAGATCTTTGAGAGAGGGCAAGTTCGCTTCTGGCTTCAGGCTGAGAAGCTGTCTTCCGCTGTCAATTACAGATTCATTGTTAATGACAAGGAGGTCACCAGCAGTGAGTCGCACAAGATTCACTGCGACACCTCCACTGGCATTATCGAGATGATGATGGATAAGTTCACATCGCAGAGTGAGGGCACTTACACCGTGCAGATGCAGGATGGGAAAGCCAAGAACCAGTCATCATTGGTTCTCATTGGAGATGctTTCAAGGCTGCTCTTGAAGAGGCTGAGTTCCAGAGAAAGGAGTACCTCAGGAAACAAGGTCCTCATTTCCTGGAATATATCCATTGGCAAGTAGAGGAGGATTGCACTGTTATGCTTGTCTGCAAGGTTGCCAATGTGAAAAAGGAGTCTGTTTTCCACTGGTTCAAGGATGACGAGAAGATCGTTCTGGACGAGCCCGTGGATGTGATGTCTGGAACATTAAAGTTAGCAATCCCGGAGTTCTCAAAGAAAGACCAGGGTGTTTATAAGGCAACTCTCAAAGATGACAGAGGACAAGACGTGTCTGAGTTTGAAATTGTCGGCAAAGtatttgaaGATATCATTAATGGAATTAGCAAGATTGCTgGAGCATCTGCCTCCGAGCTGAAGATCCAGTGTACTCCAGAAGGAATCAGACTCCAGTGCCACATGAAGTACTACACGGAAGAAATGAGAACCATCTGGTGCCACAAAGAGACAAAGATTTCTTCTTCTGAAAAGATGAGGGTTGGCGGCTCCTCTGAAATGGTCTGGCTGCAGATCTGCGAGccaacagacagagagaagggaAATTACAGCATTGAGATATCTTATGCCGATGCATATGCAGAATTCCAGAGACTCAAGCAAGCGGCCTTTGCAGAGAAGAACCGTGGCAAAGTGGTTGGTGGTCTGCCGGATGTGGTAACTATCATGGAAAAGAAGACCTTGAGTTTGACATGCACAGTGTGTGGGGACCCCTCTCCGGAAGTGGTCTGGTACAAGAACGAAAAGGAAGTGGAGTTGGATGAGCACTGTGTCGTGACGCTTGAGCAAGGGAAGTTCGCCTGCCTGACCATCAAGGGCGTGTCGACAGAGGATTCTGGGAAGTACAGCATGAACGTCAGGAACAAGCACGGCGGGGAGACGGTGGATATCACTGTAAGTGTGTACAAGCAGGGTGAGGAGATCCCCACACCCAAACTGGGCCAATCCAGACCCGCTCCGGCCCatgccgccgccgccgccgcctcgGCTGCCCCCGCCCCCGCTGCGGCCCCCAAACCAGCAGCTAAGAAGCTCGAGCCCCCAAATAGAGGAAGATCTGCTAGGAAGTAGATCcacaactaaatatatatatgaaggcCAAGAAACAAATTGGCACTAAAATAATGAGTTTCTAGCATGAGTCTTAGCCAAAGGTAGATGACGTTTCATTTTTCACTAAGGAGGCAGCTGCGTTCTTCTTCGCCTCATATCTCGAAACTAAAAAAGGAAAGTCAAGTGCCAGTGCTTTGGAAGTTCCTCGTATAAACATCACAACCGCTGTGAAAATCTCTGTCCTCACAGTGTAAGAAGCTGAGCTACTTCCAATGACCTTGAAATCTATCCCCAGAGGCACTTTGGTGAAAAATGACCAGCTTTGATGTTTAGTTGATTAaatctttgtgttttaaaagctgCACTTTCAACCGGTGCAGCGATTCTTAAAAGTCTTAAAGCGTTCACTTCCTCGTGGGTGGATCGGTTAGGAACGCCGAGCGCTATGACCCTTACAGCACGCACTGTTAGCAGACATCACTCGACTTAACCTCACTGCACACTTGCTGTATTGCGTTTCCTCTTGCTTTGTGTTAATAAAGATTAGAAATCAG

Function

GO: NA

KEGG:

id description
K24495 MYOM; myomesin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001765 True 4932 mRNA 0.49 37 15230372 15258616

Neighbor

gene id symbol gene type direction distance location
AMCG00001755 mcph1 coding downstream 592634 14623800 ~ 14637738 (-)
AMCG00001754 agpat5,LOC107665182,LOC102777099,LOC107717842 coding downstream 632224 14573813 ~ 14598148 (-)
AMCG00001752 fbx9,fbxo9 coding downstream 696587 14526509 ~ 14533785 (-)
AMCG00001734 lrrc1 coding downstream 769317 14435306 ~ 14461055 (-)
AMCG00001735 NA coding downstream 799030 14425275 ~ 14431342 (-)
AMCG00001763 NA coding upstream 77405 15336021 ~ 15359019 (-)
AMCG00001764 NA coding upstream 180208 15438824 ~ 15449113 (-)
AMCG00001773 NA coding upstream 192113 15450729 ~ 15473689 (-)
AMCG00001772 NA coding upstream 267082 15525698 ~ 15548444 (-)
AMCG00001774 NA coding upstream 294077 15552693 ~ 15575397 (-)
G160132 NA non-coding downstream 666867 14559152 ~ 14563505 (-)
G160080 NA non-coding downstream 713087 14420937 ~ 14517285 (-)
G160094 NA non-coding downstream 736723 14491898 ~ 14493649 (-)
G160085 NA non-coding downstream 750013 14474242 ~ 14480359 (-)
G160040 NA non-coding downstream 914229 14311141 ~ 14316143 (-)
G160311 NA non-coding upstream 335991 15594607 ~ 15595355 (-)
G160319 NA non-coding upstream 345227 15603843 ~ 15610716 (-)
G160387 fbxo28,LOC106576958 non-coding upstream 533380 15791996 ~ 15796358 (-)
G160538 NA non-coding upstream 975799 16234415 ~ 16235803 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding upstream 1056711 16315327 ~ 16315563 (-)
AMCG00001756 NA other downstream 659445 14550689 ~ 14570927 (-)
AMCG00001733 NA other downstream 757213 14463730 ~ 14473159 (-)
G159976 NA other downstream 1078817 14147628 ~ 14151555 (-)
AMCG00001710 NA other downstream 2124948 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 2253346 12942361 ~ 12977026 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 240937 15499553 ~ 15501793 (-)
G160255 NA other upstream 245695 15504311 ~ 15520639 (-)
AMCG00001784 NA other upstream 432953 15691569 ~ 15702500 (-)
AMCG00001791 fam98a other upstream 570142 15828758 ~ 15833806 (-)
AMCG00001843 NA other upstream 1832737 17091353 ~ 17092549 (-)

Expression


Co-expression Network