AMCG00001772


Basic Information

Item Value
gene id AMCG00001772
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 15525698 ~ 15548444 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001772
ATGCGAAAGAGGAATAATACGCAGACCGTGGAGCATGACAGCTCTGTCACCAGTACCTTGCTGGACAGCAGCTCGGAGCTGAAATACTGTCACAACACAGGACCAGGGGACCCCCAGCCCAGAGGGGAGTACGATTCTGCAGACCCCGACTCGGACAAAGCCATGAGAAGAAAAATGAGGAGCGCGTTCTGTCTGAGGGACTTGGCAGGCACACATCACCTTGAATCGGGGACAGCTCACCAGGCGGGGGCTAACGTTTCGGGAAACACGGTCCTCCCAGGGGGTGTCAGTCTTCAGGCAGGCTGTCCGTGGTGTCTGTGCTGCTCCTCATGGCGCAGTGCTGGGCTGGAGAACGCAGTCTTCGTGGAAGCGCTGGGGGGGGTCTGGAACTGTATTCATACTGCACCACGTTCTGCAAGCCCAAACTGGAAGGCCTTACCTGCCATCTGGATGACTGGAAGAAGCCCCAAGCCCTTCACACTCTCTTTATTCCTAGACAGCATCACGTTTGCCATCTCCACTATGATAATGTATGGGTTGGTCTTCACACTGAGGAAGATTTTCCTTTGGATGCTGGGAGTCTACTTAACCATTCCATTCATCGTTAAACTCTGCCCTTCCATTCAGGCAAAACTAGTTTTTCTAAACTTCGTGCGGTTACCTTATTTTATTGACTTGAAGAGGCCCCAGGACCAGGGCCTGAATCACACCAGCAACTTCTACCTCCAGCCAGAGGATGGGATCAATATCGGAGTCTGGCACACCGCCCCGTCTGTATTTTGGAAGGACGCCCAGGGTAAGGACCAGGCGTGGTTCGAAAGCACCTTTCAGTCCTCGCACCCTGTCATGCTGTATCTACACGGCAATGCCGGGACCAGGGGTGGGGACCACAGAGTGCAGCTGTATAAGGTTCTTAGTTCATTAGGGTATCACGTAGTTACATTCGATTACAGAGGATGGGGGGATTCGGATGGCAACCCCTCCGAGAGAGGAATGACCGCAGACGCCATCTTCATGTATGAGTGGGTGAAGCAGAGGAGCAAGACCAATCCCTTGTACATCTGGGGTCATTCACTGGGGACGGGGAACGCCACCACACGCTTTAATCTTGGAATCTCCTTTCACCAACATACGAGAGGAAGCAACAAATATTTGCCTGGATTTGACTGGTTCTTTTTGGATGCCATCACTGCAAACGATATTCGATTTGCAAGCGATGAGAATGTGAAGCACATCTCCTGCCCCACGCTGATCCTCCACGCGGAAGATGACACCGTTGTACCATTTAATCTAGGAAAAAAGCTGTACAACATCGCTTCAGAGTCCAAGAGTCTGAGTGGGCACAAGGTCCAATTCATTCCCTTCTCCAAGGCCCTGGGCTACAGACACAAATTCATCTACCGGAGCCCCGAGCTGCCACATATACTGAGTGATTTCCTTGGCGTATCCCAATCGCAAGCATAGCTGCCTAAGTTTGGAGTCTAAATTATTCCTGTGTACTTTCCaacaccaccaccccccactaccacccacacacacacacacacgcacacacacccttcCCCCCCagacactgttacacacacaagcatggGCTGGTGCTCCATTACCATCCATCACCCCCTCAAACTGAGAAAAACAAGGCAAACTGTGGGAGCGCAGTCCTTTCTGGGGATGCGTGGCCGGGGAGATGGGAGGACAGCCCGAGCACAAAGCCAAGCGTATGCACTGACGCAGGAGCCACGTTTCGAGTGACCTCTGGAGTGGGAAGAACAAGAGACCTCGGTGAGCCTGGAGTTTTTATTTGCACAACAAATCTAAGCAACCTTGGGGACACAACATGCAAGTTCTTTGAAATCCCACTAGGTGACATCTGGACCTGAAGAACGGTTTGTGTACCTGGCAGAGCAGCTGCCTCAACTTCAACCATGTGTTGGGCAAATGCAAAGACCCTGcgcattgattgattgattgatttttattttttttaatgcttgaaCCTTTATCATTGACTAATAGGAATAGGCAGAGAAGGTGACAGAAATACAAAGATCCAGGCAAGGTGAAGCTGCATATATCTACACATGAACACCACTCAATACACTTTCACCCGATTCGGTACCATAAAAGAGACGACTATTTCCCTATTGTATTATATACAATCTAATTCTTCACCGAGTCACATAGGAGCTTCCTCAGCCAGGCTAACTTAACGAGTCCTCAGGAAAGACGCGTGAATTTGAATAAGATGTCATACAATCTTGCAATCTCCTACCCGAACAACCAATCCTTATTAAGTGGACCAGACTTTAAAACACCAAACCATCCTAAAATGAAAGCTCAGCAACCGCATTCAAAGAAATCTCACAGATTGTGCGTATTAGTCTGCGAATCGGTGAAATCTTTTCATACCCGGTTCCTTGGTGCCAGCTTCTTATTGATCGTCCATCCGTTCGCCATTCATAGTTGTGTGTGGCAAGAACTCAGTTTTGCTCTTccactttgaaaacaaatgtttaggCTTCAGACTGAGGGAAAAGAGATACCCTGGAAAGTGGTTGGATGCAGTGAATGAAAATCAATAGCACTTTGAAGCTGAAATAACTTACCTTGAAAGCAGAGACTGTAACAAACACTAAACATACCTCCCCCGTCTGTCCCAGTAGTTTGAAGATGTCTGTAATAACAGCGTGCTTTAATAATTTCCCTTGAATTTGAAAAGGTCATTTAAATAACCACTTGGCTATAGCAATGCTGTAATTAATGTAGTATTAAAGTTTTGGAACATCGCCTCTGTATTATGCAGTCTGCAAAGAAATAGGGGTGAATTTAGATTATAAAAGTAGCAAATTTTATTAAAGCACACAAGTAGTCTGTGAAAGGCTTAATTAATGTAAGAATTTAGGAGCCCTCAAATAGGACATTACTATACAATACtatgtcaaaaacaaacaaaaatacctCATAGACACAGCAGGAACTTTCTTGTGGGTTGGGTGGGTGTGTTTCAGTACCAGATAGTCTGATATAAGGAAGTTTATCTCCTACGTACAGGTCATGCCAGTGGAGGTGGATAGACCATATTCGAACTAGAGCTATCTTTATTTTACTCCGGCTGTGTCGCTCCTTTTAGTTGTCatcaaacaaatggaaattaatttggAGCGACTGCCATTCTTTACCCGTTCGTCTGCGCCTCATCCGTGGTCTCGGCAGACGGTGTGAGGAAATATCAGGGATGCTACAAAGGGAAGAAAGAGAACCGTACAAAATGGTGCCGTGCAGCTAAACTCTAAAACTGTCCTCCATTCTCTGTGATGTCTATCTGGACATTCAAACGATCCCATATTGCACTCCACGCCTCTGACCTCCTGGGGACATTTGGGTTGCGTTCGGGCCAAAATAAAAGGGCATCCTCTCTGCTGGCTGAGATGTTCACAGCccagtacttaaaaaaaaaaaaatgaacatatctttatttgtaaatgtgcaACTGATCATGAggtttatatgtgtttatatatcaaTTGGGTTGTGATGGTCCACATTCCAGGAAACAGTTATGGATTACATTGCTGTGCtgctttctgtaaaaaaaaaaaaaaaaacttgaccAAACGTATTTAttcatggctttttttttttttataatcagtttaacttttttttttcgccTGGCTTGTTTGGCAAGAGAAATTCCACGCCACTGTATAGAAATGACCCATCATATGCGATAAGAGATGGGGAAACTGAAACTCACATCTCCGGCCGAGTCCAGAGCCACCCTGGGTAGTTGGCAGCCCTGGGTGTCCGGTATGGGAGGGGAAACGTGATTGGTATTCATAAGATTTCATGGCTCAATGGTCACCAGGCAGCTTGACACAATAGTGCATTtatccattgttttatttaatgcgATTCCTTTAGAAAGTGTTACGCTGGTCTGGCTCTTTCCGGATGTAGTCATACAGACACATTAAGAAGCAGCTATTCTGATCATGTGAACAACGGATAGTTAATCATCATTAAAACCTGACTCTTTGATGCTTAAGTTACTGATACTATATTGCTTGTTATCcgctttaatttattattgttttaagaatTCAATTAAGTATGAATATATTGATAATAGCTCTAAACTGAAGTGTTTTGGTTTCTAATTTGAATTGATTGCTTTGTACCTCTTCTATCATATCCGCATGGAACATGTTGATACTAACTCTCTATGGCACTGTAACAGTTCATGCACCTTCTGTCGTACGGTATTGACCTTCCTCTGCATAACAATATGAAGCACCTACCTCCTGCTACTGTGGAGACATTTCCTTCAACATCAGAAGCCTACTCAGAGTGGTTTGTACACATATTCTTCTGTTCTCTTTATTTCTGATTGTGGAGGTTGCTTAAACAACCCCGCAAACATACAACGCCTCGTTAAGATGTTGAGTGTGGCACAGTGCTTTGAAGCCCCGGGCTGCAGCACATAAACACTCCTCCACCGGGTTTCCCGTCCTTGTAGGCTTTGGTTGGGTTTCcacacaattattaatatttgttttaacgTATCAGCGGGTTTCCCTGTCGAAGCTCAATCTAATCGGAAGCAATACGTTACTGATAAGAACAATACCCGATAGAATGTGAAATAGTCAACTGAATTCCGGGATGAAGTGGCGGGGCTGGATTAACAGTATAGCCAAGCGGGTGTCGCAGCCGAATACGCCAGGAATGAGCGCCCGTCTTCTGTATAGTACGAAATGATAAACCAGCAGGTGTCGGCACATTTAAGATATTTTGGAACCAGCGCTGAACTGGTCAGCATTGCTTGTAGAAAACTGAACCTGTTCTCACTGCGGTGTGTTTTAGGTGTAGAATCGGTGAAATTAGCTCTGTCGCTGCCTAATGCTGATGCATGAATGCTTGTGTAGCTACATTTCTACATCCAGTAGAAAAACTGCAGCTTCGGCGTTGTATTTTTTCCAGGGATGAATTTAATGTAAGTGCTGTTTCCTTGTCCTTCTCTGCTATGGGGAACCGGCTGCTCCGATGTGACCGACTAATGGGATTGCTGTCGTGCAGTGCTCTTCTGATCTCTCTGTTTAGATAAACTAATCATCGGTGTGCTGTAAGACGCCAGCTTTTACAAATCGGtgaatttcattatttgttcaaTCGGATTCCGTCGTACAGGGAATGTTTCGGGCCGATCCACGAATCACACATCAGTTTCCGGGTGTATGGAAACGGACACCAGAACTGGAAGGGGGTGAAAGATGGTATGCGATGGAAAAATGTCTGTGACTGTAACTTGGTGCGCTGCTCCATTCGGTCTCTAGCGGGTTGTTGGATTATGTCGACATTTAGTTACGACTGAGAACTTGGAACGAGAGGCTGGTtggatatttaaattacagcaaCTTGGcaccattattttttttgtatcgtGCATTGGTATGATTGTACCTTGGCACAGTATCGGTCTCACTTTAAATTCAGGCCCCGAGCTCTACTGCACTCCAAGTTTTTCccaccagaaaataaaaagcctagGGGTAAAATATGTAATCTCTATGGAGACCAGAGACCTCAAGGGTCAGTGAATGTAGAGAGGGGAGTTTaccagcatgcactgcagcaCAATTTTTTAACCCAGGTCTTTCTGAAGGTACTGAGGAGCTGTAGGCTTGAGCAGATCCAAACCGTGCCCCGGTGACTGTTCATCAGTGTCATTGTCATTCTTCGTTAGCATACCATCACGCCATGCCCGGACGGCTGTGTGATTTCTGTGTGGCCCTGTGTGTTTTATCTCAAATCCCCTTGCTTCCACGAGAAGTGTTATCCACAGACATCTCTCTCCAGTGGTTACCAAGTTCAAACTGTTTAGAAGGttcaatgtttttctctttttttgtaagCTGCTAAACTTGACTGGattgaaaatgattattttatgtatgtttttaaataataaataacaataaaaatattacCTCAATTGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0047372 acylglycerol lipase activity molecular_function

KEGG:

id description
K13704 ABHD12; abhydrolase domain-containing protein 12

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001772 True 6002 mRNA 0.45 13 15525698 15548444

Neighbor

gene id symbol gene type direction distance location
AMCG00001773 NA coding downstream 52009 15450729 ~ 15473689 (-)
AMCG00001764 NA coding downstream 76585 15438824 ~ 15449113 (-)
AMCG00001763 NA coding downstream 166679 15336021 ~ 15359019 (-)
AMCG00001765 NA coding downstream 267082 15230372 ~ 15258616 (-)
AMCG00001755 mcph1 coding downstream 887960 14623800 ~ 14637738 (-)
AMCG00001774 NA coding upstream 4249 15552693 ~ 15575397 (-)
AMCG00001777 ppp2r5d,LOC106605890 coding upstream 64232 15612676 ~ 15640633 (-)
AMCG00001779 NA coding upstream 94375 15642819 ~ 15654841 (-)
AMCG00001778 NA coding upstream 106927 15655371 ~ 15677438 (-)
AMCG00001783 lrrc73 coding upstream 224886 15773330 ~ 15779288 (-)
G160132 NA non-coding downstream 962193 14559152 ~ 14563505 (-)
G160080 NA non-coding downstream 1008413 14420937 ~ 14517285 (-)
G160094 NA non-coding downstream 1032049 14491898 ~ 14493649 (-)
G160085 NA non-coding downstream 1045339 14474242 ~ 14480359 (-)
G160040 NA non-coding downstream 1209555 14311141 ~ 14316143 (-)
G160311 NA non-coding upstream 46163 15594607 ~ 15595355 (-)
G160319 NA non-coding upstream 55399 15603843 ~ 15610716 (-)
G160387 fbxo28,LOC106576958 non-coding upstream 243552 15791996 ~ 15796358 (-)
G160538 NA non-coding upstream 685971 16234415 ~ 16235803 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding upstream 766883 16315327 ~ 16315563 (-)
G160255 NA other downstream 5059 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 23905 15499553 ~ 15501793 (-)
AMCG00001756 NA other downstream 954771 14550689 ~ 14570927 (-)
AMCG00001733 NA other downstream 1052539 14463730 ~ 14473159 (-)
G159976 NA other downstream 1374143 14147628 ~ 14151555 (-)
AMCG00001784 NA other upstream 143125 15691569 ~ 15702500 (-)
AMCG00001791 fam98a other upstream 280314 15828758 ~ 15833806 (-)
AMCG00001843 NA other upstream 1542909 17091353 ~ 17092549 (-)
G160817 NA other upstream 1982422 17530866 ~ 17531990 (-)
AMCG00001865 NA other upstream 2259574 17808018 ~ 17810097 (-)

Expression


Co-expression Network