AMCG00001781


Basic Information

Item Value
gene id AMCG00001781
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 15679825 ~ 15690746 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001781
CAAAGGCTGTCATTGCTTATTGGTTCCCGATTTATTGTGCTTGTATATGAGCCGGTAAAGTAAATATGAAGGATTGTTGACAATGGGAGACATGagtattacaattacaataagtaCGCACACCAAACATCTTAATTATGAGGTGCAAGTTTAAAGCTATACGCCATCACGTATCATGAGAGAAAGATGCTAGTTTGGCTGTGAAAGATGGCTGACTTCTTGGCAGACCTCTGTCACACAGATCGTCTGGACCCCTTGCCACTGTGGAAGGATGGTACCGTCAGCCCCTGTTTTAACCAGCTGCTCCTCAATGCCCTGCCACATTCTGTCCTTGCGCTCTCCAGCGCCTGTTACCTGAGTATACCACGatcCAGGTTGTTCTTAGACTTCCAGTCATGTGGCTGGAGCTGCAGAGTGGCCATGGCAGTGCTCATGGTTTTGCTGTTCATTGCAGACCTGGCTGTGCTGCCCCTCTTGCACCAGCCATCTCTGTACCTGGACGTACTGGCCGATGGAATCGCCATCGTGGCCTGGGTTGTCCACTGTGGGGCACTGGTGGTCCTCCGGAGGTCTGCCTACAGGGTGTCCAGGGGCCCATTCACCCTACTGGTCCTGGCTGTCCTTCCGGCTGCTGCTCTCATCATCACCCTGGTGTCCTACTGTAGAGACAGCAGCTACCTGGACCTTGGGCAACCGCTCCGAGTCCTGCGCCTGGCCGTGGTGTCTGCCCAgctcctgctgctcctgctctACGTGGTGGCGTTTGCCGTGCCCTGCCCACGAGAGGGCGGCATTATGTCTATCAACGACTCTGACGGGGCACCTCTGATCCCAGGGGACAGTTATCGCGGTCCGGACGGGCAGATTGTCGGGGAGGACGGGAGCAGCTGGGTCTCGCGGCTCTTCTACTTCTGGCTGAACCCGCTGATGACGGTCGGCCGTCGGGGGGATCTCGAGCGGCCCTCGGACATCTACCTCCTTCCCAGGAAGCTCCGCACCAAGGCCGTCCGGGAACACTTCGAGCGCTGCTGGGAGAGGTGCAGGCAGGAGCGAGCGGAGCAGCTAGAGGCTCCTCACAGAGGCAGGGCCCAGGACTCTGGGAGGAGTGTGCAGAACGGTACGTGGAGTCTGCCTGACCAAGACAGAGGCCACGGCAAGGAAGAGAGCCAGGACAGCCCTCAGGAGCCCCAGGTCAGGCTGCTGCGTGTCCTGCACACCGCCTTCGGGTTGAGGTTCTACCTGCTGGGGGTGCTGAAGCTGGCAGGGAACATGCTGGGTTTTGCCGGGCCACTCCTGCTGAACAGCCTGGTGGGCTTCATGGAGTCGGGGCAGGCACCCATGAGTCAGGGAGTGTGGTGCGCCCTGGGGCTCTTCGCCAGCACCTTCCTGTCTGCCATTCTGCGCAACATCTTCACCTTCGAGGTGTCCAAGGTGTCCCTCTCGGCCCGGGCTGCCGTCATCTCCGCCATCTACCGCAAGGCCCTGCGTGTCTCCGGCACCACCCTGGCCCGATTCACCCTGGGCGAGGTGGTCAACTTCATGAGCACCGACACCGACCGCCTGGTTAACTTCTTTGTCAGCTTCCACGAGGTAGGCGTGGCCTTCCTCGGGGGGCTGGCTCTGGCGCTGCTGCTGGTGCCGCTCAACAAGGTGATTGCCACCCGCATCATGGAGAACAACAAGCACCTGCTGAAGCACAAGGACAGCCGAGTGAAGCTGATGACCGAGATCCTATTCGGGATGCGGGTGATTAAGTTCTACACCTGGGAGAAACACTTTACGGAGAAGATCGCCGGCTGCCGGAAGCAGGAGCTCTCCCACCTCAAGACCATCAAATACCTGgacgctgtgtgtgtgtacacctGGGCAGCCCTTCCGGTCGTCATCTCCATCCTCACCTTCATCACGTATGTGCTGCTGGGCCACGAGCTCACGGCCGCCAAGGTGTTCACTGCGCTAGCTCTGGTCGGCATGCTGATCATGCCCCTGAACAACTTCCCCTGGGTCTTAAACGGCACCATAGAGGCCAAGGTGTCCCTGGACCGAATCCAGCGTTTCCTGCGACTATCGGACCAGGATCTGAACACCTACTATAGCatggtgGCCCCAGATGATCCCCTGACGACCCTCCAGATGAAGCAGTGCACCTTCTCCTGGCTGAGCCCGGACAGCGGGGACGCCCCTGTGCAGACCGACACGGGGGACGGCCCACAGGAGGGcagtctgcagctacgcagcctcAACCTCACTGTGAAGAAGGGGGCATTGATTGCGGTGGTGGGGAAGGTAGGATGTGGGAAGAGTTCCCTACTGGCAGCCATCACTGGAGAACTGAACAGGTGCGGGGGGGCGGTGTACGTGCAGGGCAGAGAGCGGGGCTTCGGCCTGGCCGCCCAGGAGCCCTGGATCCAACACGCCACGGTCCGGGAAAACATCCTGTTCAACAAGGAGCACAGTGGGCGGCTGTACCAGGCGGTCATCGAGGCCTGTGCCCTCACTGACGACCTCAACATCTTGCCATTTGGGGATCAGACGGAGGTAGGGGAGAATGGAGTGACACTGAGTGGAGGACAGAAAGCCCGTGTCGCCTTAGCCAGGGCTGTGTACATGGAAAAGGACATCTATCTCCTTGATGATCCCCTGGCTGCAGTTGATGCTGACGTGGCCAGCCACCTCATGGAGAAGTGCATCCTGGGAATCCTGAAGCACAAGACCAGAATTCTTTGCACCCACCGCATAGAGTTCCTGGACAAGGCCGATGTGGTGGTTCTGATGGATGATGGGAAGATTGTCAGAACAGGCACTCCTGCAGAAATCCTGCCTTTGGTTGAAGCTGTTCCCAAAACCAGGAAGAATAACAGCAACATAAAGGAGAAAGACAGCGTGGAGGGCGAGCAGGGCGTGGAGCAGCCTGCAGACCAGGTCTGTGTGGCAGACAGCCTGGTGGCAGAGGAGCTAAAGCAGTCTGGGGTGGTGGCATTGCGGGTCTACAGGGCCTACTGGCTGGCTGTGGGCGGCTGCCTGGCCTTCTCCATCCTCTTCTCACTGCTGCTCATGCAAGCCTCCAAGAACATCTCGGACTGGTGGCTCTCGCACTGGATATCTCAGCTGAAATCCACGGACAACGTCTCCCTCAGCGATCTCTCGCCTGTTGATGTCTCACCCCATTTACTACTCTTTTCACCTGGAGGACTGATGTCTCCGGTTACTCTTCTAGGCACAGATCCCAAAGCCAATAGCTCCTTCGATCTGAAATACTACCTGACTGTGTACGGCTCCATTGCTGCCGCCAACTCTCTCCTCACGGCGGTCAGAGCCTTCCTGTTCGCATACGGGGCCATCTGCGCTGCCACAGTCATCCACAACAGGTTGCTGGACAGGGTGCTGAAGGCCACGGTGACGTTCTTCGACACCACCCCCCTGGGGCGCATCGTGAACCGCTTCTCCTCTGACCTGTACAGCGTGGACGACACCCTGCCCTTCATCCTCAACATCCTGCTGGCCAACGTGTTCGGCCTGCTGGGCATGCTGGTGGTGATGAGCTACGGGCTGCCCTGGATCCTGGTGGTGCTGCTCCCGCTGGCCGTGGTCTACTACATCATCCAGCGCTACTACCGGCACACGTCCCGCGAGCTCAAGCGCCTCTACAGCCTCACGCTCTCGCCCATCTACACCCACTTCTCGGAGACGCTCACGGGCCTCGGCACCATCCGCTCCAGCTGCGCCGCCCCCAGGTCCGCCCCCACTGTGGCAGCGTTGGCGGAGCGCCGCGTAGCCCGTCCCGCTCTGACGTTCGAGGAGGAGAACGAGAGCCGCCTGGAGAGGAACCAGCGCTGTCTGTTCGCCAGCAACGCCGCCATGCAGTGGCTGGACATACGGCTGCAGCTGATCGGAGTCGCGGTGGTGACAGGCATAGCCGTGATCGCGGTCATCCAGCACCAGGCACGGTCTATAGACCCAGGCTTGGTGGGGCTGTCTCTGTCCTATGCCTTGTCTGTCACCAACCTGCTCTCTGGGCTCATCTTCAGCTTCACTCAGACCGAGACCCAGATGGTGAGCGTGGAGCGGACGGAGGAGTACTCCAGTGACATCCCCATAGAGCCGCAAGCAGGGAGCCTGGAGGTCCCCCCAGCGTGGCCCGAGAGGGGGCAGATCGAGTTTCAGGAGGCGGTGCTGTTGTACAGGCCGGGACTGCCCAATGCCCTGGACGGGGTGAGCGTGGTCATCCGGCCCGGGGAGAAGGTGGGCATCGTGGGCCGGACGGGCTCGGGGAAGTCCACCATGTTCCTGGCACTGTTCCGCATGATGGAGCTGAGCGGCGGGCATATCGTCATCGACGGCGTCAACACCGGCCTGCTGGGCCTCGCGCAGCTCCGGTCAAAGCTGGCCGTCATCCCTCAGGACCCCTTCCTATTCAGTGGCACAGTGAGTGAGAACCTGGACCCCTGTGGCCGGCACTCTGACCGCCTGCTGCTGAACGTGCTGGAGCAGTGCCACCTGGGAGAGGCTGTCGCCAGGATGGGCGGGCTAGCGGCAGAGGTGGGGGAGCGAGGGAAGAGCTTCTCCTTGGGACAGCGCCAACTGCTGTGCCTGGCGAGAGCACTGCTGACACAAGCCAAGATATTGTGTATCGATGAAGCTACAGCCAGTGTCGACCAGAAGACTGACAAGCTTCTTCAACAAACCATCCGGGAGAAATTTCGGGACCAGACCGTCCTCACCATCGCGCACAGAATCAACACTATCATGGACTCTGACAAGGTGCTGgtgatgcatgctgggaaggcAGTGGAGTTCGACACCCCAGCCGTTCTCTGCCAGAGAGAGGAGTCGTTCTTCTACAAGCTGGTGCACGGCCGGGCGGACTGACAAGGCGGTGGCCCGGGCTTGGCGCTGTGGGAGACGGGCTGCCCACTGACGGTGGGCCCACACACCAGTAGGCAGCTGGAATATACTGACAGGCCAGTTTTCCCAGTCATACACTGATGACAGCTGAGGGACTGGGACgatacatgtttatattatttaaatacgcAGAAACAGACTGTGAGTCTTATATAGTATTAAATACTCATTTACTTATCAGTTTCCCCAAATGACTGAATTTGATTGTCATTTTCCACACTTCTGCATTCAGCAACAGCTTGTTTCGATAGCATGTTTACATTCATAACCTGTTTAAAATTGCTGTTCCCAATGCAAATGTCTGGACCCAAATGCAATcctgtttaatattttgtggATTCTAACAAGCAAGATaaggtatttaatattatatatgaacCCTTAAGACACTCAGGCACACATGGTATTATTGTAAGCAGAGGTGTTGACACAAAACACTCTATCTGTATGCTTGAAAACATTCCTGTAGCTTTATTTTAGAAGATTAATGACATTTTGATAACTACACAGTGATGATTACCTGTGTAGCAGAGAAACATGGCCTTCTCTGCTGACAGGAAGACAAGCGATTCAGACTGCTCTTTAGTCTGTGCACACTTTTTACACACCCTGCTGTGTCATATCATAGCATAGCGTATCTTTTGCCATCGGCCCTGCCATCACCagtaacaatatataataacacaAAAGTACTGAGCTCAATCATGTCATTCGTTATTTTAAAAGCGACTTTACTCCACCTCCACAGATAGGGTCTAGGGGCAGATTCTgctcttttattgttttacctCTTCATTGTTCACTCGTAATTTGCATTATGAAGTATGCATCTGATTTTCATATTCCTCTTTGCATGCGGTTACGTGGgttttgtttgaaagaaaaataataatgcaagtgGTCCTTCAGAAGGGCTTTCTTCGACAGATTAAAATGGCCCCCATTGAACATGACGAGCGACAGTAATTATTCTGCCGGATTTTAATTATGTTGTCACCCAAGGGCTCGTGAAGTACATCGAGTGCAATTTTGAGGAAAGGCGAGTCCGTCTCAAGCTGCGGAACCTGTCCTGACACATTCCCGGCATGCAAAAGAGACACACGGGAGATTGGCGGCAGTCGGGACCTTGACACCGCAGATGGGATGAGTGGCATCTTTCAAGTCTGTTTTCCATGTCATTGTTTCCGTGCCAGACTCGCGCCTTTACTGCAGGATGCGAGTGGGATAATCAGTCCGATAAAACAAGTGAATGCTAGAGGAGAAACCCTCTTGACAGACACTTTAGTCGTTTTCTCTGTACACATGATCAAAGATGAAGGATCACGCTGCAGCCGAGCTcgtctgtgttttgttcagtggaacattttaaaatccaaacaCTATCTCAGGGTAACAGAATAGTGCACTGTGTCGCTTTGTATCTGTAAAGAGATGACCTGATTTTTGTCAGGAACTAACAGGGTGTATTTAAACTGCACTTGTCATTGTATACATGTAAGTGTTCCTGCTGTAATTCTTTCTGTGTTGGCGTTTGTGGAGCTAGACCCTCATTGAAGAATTAAATCACTC

Function

GO: NA

KEGG:

id description
K05674 ABCC10; ATP-binding cassette, subfamily C (CFTR/MRP), member 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001781 True 6474 mRNA 0.55 23 15679825 15690746

Neighbor

gene id symbol gene type direction distance location
AMCG00001775 NA coding upstream 60707 15613012 ~ 15619118 (+)
AMCG00001776 NA coding upstream 69138 15578175 ~ 15610687 (+)
AMCG00001768 gins1 coding upstream 127410 15549591 ~ 15552415 (+)
AMCG00001769 NA coding upstream 154519 15502070 ~ 15525306 (+)
AMCG00001770 NA coding upstream 178120 15493247 ~ 15501705 (+)
AMCG00001780 NA coding downstream 29114 15719860 ~ 15769808 (+)
AMCG00001782 lrrc73,LOC106605838 coding downstream 82933 15773679 ~ 15775502 (+)
AMCG00001787 rpac1,polr1c,LOC106576959 coding downstream 94199 15784945 ~ 15788438 (+)
AMCG00001786 fbxo28,LOC106606749 coding downstream 97960 15788706 ~ 15796435 (+)
AMCG00001785 degs1 coding downstream 108187 15798933 ~ 15803681 (+)
G160200 NA non-coding upstream 262271 15402285 ~ 15417554 (+)
G160144 NA non-coding upstream 978369 14701134 ~ 14701456 (+)
G160129 NA non-coding upstream 1047335 14629303 ~ 14632490 (+)
G160116 NA non-coding upstream 1116456 14558766 ~ 14563369 (+)
G160107 NA non-coding upstream 1153317 14525737 ~ 14526508 (+)
G160375 NA non-coding downstream 138030 15828776 ~ 15829766 (+)
G160463 NA non-coding downstream 423598 16114344 ~ 16114699 (+)
G160464 NA non-coding downstream 426459 16117205 ~ 16119266 (+)
G160542 tubb4b,LOC106575097,LOC105893757 non-coding downstream 586060 16276806 ~ 16278054 (+)
G160648 NA non-coding downstream 1209149 16899895 ~ 16902440 (+)
AMCG00001762 NA other upstream 240794 15432337 ~ 15439031 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other upstream 345245 15331620 ~ 15334580 (+)
G160026 NA other upstream 1409635 14269615 ~ 14270190 (+)
AMCG00001691 NA other upstream 3346125 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 4921967 10747489 ~ 10757858 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 546516 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 1488848 17179594 ~ 17182601 (+)
AMCG00001846 NA other downstream 1726605 17417351 ~ 17462934 (+)
AMCG00001881 NA other downstream 2497156 18187902 ~ 18209391 (+)
AMCG00001883 NA other downstream 2519263 18210009 ~ 18217138 (+)

Expression


Co-expression Network