AMCG00001783 (lrrc73)


Basic Information

Item Value
gene id AMCG00001783
gene name lrrc73
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 15773330 ~ 15779288 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001783
GTCCGATTCTGTCTGCTCGGCAGCCGAGGCACTTGTTACATCTATTGCTCTGACACGCGTACCGACCTGTATGCGTTTCTGCTGGATGCTTCTGAAAACGCAGGCGAGAGAAACGAGCCAGCCGGGGTGAAAGCGAAATTCGGGCACTTCAGCACAGGAAACGGCCTGCCCGTGACGAAGAGCGGCTTTGCGCTGCTGCACGCATGCATCCTCTGCGCCGTGCCATAGAAACCGGCCCCTGCAGCGGGTGCAAACAAACCGCGCACGGAGCCGCACCGAGATCTCCACCGCCGTGCCCGGGCGTAGCTGATTGCATAGGACAGCTGCTTCCTCGATGGAGTGTATATCTGAATAATGCATCAAAGCAGGTCCTGCCGAGCTCGACTGCGCAGCGCTAACCCAGGACCTGCAGACTGCGTGTGATGTCGCTGCGCCGCGCGTTTTCCTTCCACATTATAGGCACTGGCACCGAAATGCAACATCTCTTCCTCAGAAAGGAGGCACTGGCAGTGATCTGAGGTGCTCGGCGTGTTAGCATGCGTCTTAGTTGCAGTGTCTGCGGTGACAAAGATGCGCCGCTAATATTGCTACAGTAGCCGAGGGTAGTCGCCACAATCCCTGATCCCGACCTCCCTGCAGCGTCCCTTCAATTCTGATGGTGACTGGTttgcttttgtaaatgtaacCTACTTTAACTCACTCAAGATGCTACCGGGCTCCATCCAGATCACAGGGGAAGCCCTGTCCGCGGCCGAGGTCCGAGACATCTGCGACAGCCTGAAGGAGAACGGCGTGCGGCTGCTGTCCGTGCGGGGCTGCCAGCTGTCGGACCGGGACTTCGGGCGGGTGTGCCGCGGCGTGGCGGAGTCCCGCTCCCTGGCGCAGCTCAACCTCAACCTCGGGGTGGTGTCGGGCCTGGGGCGGGTGCAGCAGCTCGCCGAGGCGCTCAGGGCCAACAGGTCGATCCAGACTCTGTTCCTCCACGGGAGCCCCCTGATGGACGCAGGCCTGACTGCCCTCAACACGGCCCTGTCCACTCATCCCTCGCTGGTGTCGCTGGACCTGGGGGACTGCATGCTGGGAGACGACGGGGTGCAGATCATCTGTGGCCTGCTGCCTCCGGACGGGGCCAAGTCAGGTCTGAAGGAGCTGACCCTCAGTGCGAACCCTGCCATCACCTCCAGGGGCTGGGCCAGGCTGGCCGTCGCCGTCGCTCACAGCTCGCAGCTGCGCGTCCTCAACCTGGACTACAACCCCCTGGGGGACCAGATTGCCGGGATGCTGGCGGTGGCAGTGGCCTCCAGCCGGACTCTGGAGGTGTTGGATCTGGAGGGAACAGGCCTCAGCAACCAGTCTGCGCAGATCTTCCTGGACATGGTGGAGAACTACCCGACCTGCCTGCGCGTGCTGGTCCTGGCCGAGAACAACATCAGCGCCGAGCTGCAGCAGCAGATCTCCGACCTGCTCTCCGAGGGCGAGGACGAGGACGACAAGGAGGGAGGCGCGCGGGGCTCGGGGGGCACCGCCAGGGAGAAGACCACCTGGTTCTCCCAGAGCAATTCCAGTTCACAGATGGTTCTGGTGACGTCGGGCCTGGGGGACAGCCTATTGGCCGAGACGGAGATGTGAACCCGCCGGGAGGATCAGCTGATCGCGAGCAACCAATCACTCTGCATGATCTTTAGCACTTGTACATAGGACGACGTTTTGAATAGGCACAACCTTTGAACACCAAGTGACTTaaaagtgaattatttattttaaagatgtacaGTCTATTTATGATTACAGATATAAAGGGAATTATGTAACCCGTTAACATAGCCTCTGATAAGCAAAACGGTAATGCAGTTCATGTTGTGAATGTCAGATGTCAGAATAAACAGATTTACTTCTTAAGAAAACCGAGACCTTCCTATCAGTTGGAGCTGTGGTGTCTGCAGTCAAACGTCG

Function

symbol description
lrrc73 Orthologous to human LRRC73 (leucine rich repeat containing 73).

NR:

description
PREDICTED: leucine-rich repeat-containing protein 73 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001783 True 1953 mRNA 0.59 6 15773330 15779288

Neighbor

gene id symbol gene type direction distance location
AMCG00001778 NA coding downstream 95892 15655371 ~ 15677438 (-)
AMCG00001779 NA coding downstream 118489 15642819 ~ 15654841 (-)
AMCG00001777 ppp2r5d,LOC106605890 coding downstream 132697 15612676 ~ 15640633 (-)
AMCG00001774 NA coding downstream 197933 15552693 ~ 15575397 (-)
AMCG00001772 NA coding downstream 224886 15525698 ~ 15548444 (-)
AMCG00001792 yipf3,LOC107696384 coding upstream 1930 15781218 ~ 15784155 (-)
AMCG00001789 degs1,LOC106606739 coding upstream 19472 15798760 ~ 15817684 (-)
AMCG00001788 NA coding upstream 38995 15818283 ~ 15827775 (-)
AMCG00001790 rasgrp3,LOC106576952,LOC106606711 coding upstream 57736 15837024 ~ 15850756 (-)
AMCG00001793 NA coding upstream 71499 15850787 ~ 15865923 (-)
G160319 NA non-coding downstream 162614 15603843 ~ 15610716 (-)
G160311 NA non-coding downstream 177975 15594607 ~ 15595355 (-)
G160132 NA non-coding downstream 1209825 14559152 ~ 14563505 (-)
G160094 NA non-coding downstream 1279681 14491898 ~ 14493649 (-)
G160085 NA non-coding downstream 1292971 14474242 ~ 14480359 (-)
G160387 fbxo28,LOC106576958 non-coding upstream 12708 15791996 ~ 15796358 (-)
G160538 NA non-coding upstream 455127 16234415 ~ 16235803 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding upstream 536039 16315327 ~ 16315563 (-)
G160631 NA non-coding upstream 1037651 16816939 ~ 16817195 (-)
G160640 NA non-coding upstream 1075365 16854653 ~ 16854957 (-)
AMCG00001784 NA other downstream 70830 15691569 ~ 15702500 (-)
G160255 NA other downstream 252691 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 271537 15499553 ~ 15501793 (-)
AMCG00001756 NA other downstream 1202403 14550689 ~ 14570927 (-)
AMCG00001733 NA other downstream 1300171 14463730 ~ 14473159 (-)
AMCG00001791 fam98a other upstream 49470 15828758 ~ 15833806 (-)
AMCG00001843 NA other upstream 1312065 17091353 ~ 17092549 (-)
G160817 NA other upstream 1751578 17530866 ~ 17531990 (-)
AMCG00001865 NA other upstream 2028730 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 2080851 17860139 ~ 17865379 (-)

Expression


Co-expression Network