AMCG00001801


Basic Information

Item Value
gene id AMCG00001801
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16171241 ~ 16176554 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001801
TCTACCTTTAGGAAGCGTCTGTACAGGAACAAGCAGAGCAGGTTTGACTGTGGACTGGAGCGTTTCCAAAGGATGTAGAGGGGATGCGCAGGGGGCGGTGCGGGACTGAGGCGCTGGTGCGCATTTCCACTCCGCTCGCAGGGGGCGCCGGGACAGACACTGCCTCTCGGGCGGATCACAGCGCGGTCAGCAGCCGGTGGActgtcctccctccctccctccctccctctctccctctctctctctctctgggagtAACCATGCTGAGGAGGTCATCCCTGTGCGGAGTGCGGCTGGCGAGGGCGCTTCACGGCAGATGCCAGCACTCCGTCGGCATTATTGGAGCGCCCTTTTCCAGAGGACAGGTGAAGGATTACGGCGACCTAAAACTTGACGATATTCCCAACGATGAGCCCTACAAGCGAGTGAAGATGCCCAAGACAGTGGGCTGTGCCAACGAGAGGCTCGCCCACGCCGTCCGCACCGTGAAGAAGGATGGGCACACCTGTTGTGtccgttttgtttgtttgctcaaCTCTGTTGCAATGTCACCCCGCAGTCTGGGGATCGGGTCGATCCTGGGACACGCAGCCGCCAATCAGGACCTTTGTGTGGTGTGGGTGGACGCCCATGCGGACATTAACACGCCGCTGACCAGCCCCACTGGCAACATCCACGGCCAGTCCGTGTCCTATCTGCTCCGGGATCTGCACTCAAAGATGCCAGTCCTGCCAGGGTTTTCCTGGGTAAAGCCCTGCATATCAGCCCAGGACATTGTGTACATTGGCCTGCGAGATCTGGACCCAGAGGAACATTATTTAGTGAAGCACCTGGGGATCAAGGCGTTCTCGATGACCGAGGTGGACCGGCTCGGGATTGGCCGGGTGATGGAGGAGACGTGTGACCACCTCTTGTCGAAGGGGGGGAGGCCGATCCACCTGAGTTATGACATTGATGCCATGGACCCCTCTGTGTCTCCTGCCACTGGAACGCCCGCGAAAGGAGGGCTGACCTACAGGGAGGGCATCTATATTGCTGAGGAGATCTGTAGGACAGGTCTGCTCTCTGCTCTGGATCTTGTGGAAGTCAATCCCAGCCTGGGGAAGACCGAGGAGGAAGTGAGGTCCACTGTGCACGCTGCGCTGGACGTGATCTTGAGTTGTTTTGGACAGACTCGGGAAGGTTCCCACCCCAGTGCCTTCCAGCTGCCCGAACCCTAAACATTCAGAGGGGAAAAATCGTCACAGTATAAACAAGCTCTTATGAAGCTTTTTTATATTgataagaaaaatgtaaactacTGAATATATTTCCTGTGGATATACCACGAATTCATAATTGTAAATGTGACAAGTTCATTATACTCacgtgtatacatatatgtgtatatattgggTACAAGCTACTATTCATTTGATTTAGACTTgattgtttattgttattttactgtGAAATTTGAAGTATCTGCTTAGAGAGGGAATTTCCCTTAATTAGCAAGAGGATAGAAGAATGGACTAGTCATGCTGTATTATAACCTCCTTAACCAAGAGGAGCCAGTAGCTTGAACATAAAGGTCATAAAATCATATACAAATTCATACACATTCTcttgtataattttatatattataatcttATATAAGACTGCATTATACTGTATAGAATTTGACACTactttttgattaattttttttttcccaaagaaaacatgtagtcttttcctctattttctattgaaataaaaacaaaatgaacaaga

Function

GO:

id name namespace
GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines molecular_function

KEGG:

id description
K01476 E3.5.3.1, rocF, arg; arginase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001801 True 1758 mRNA 0.50 8 16171241 16176554

Neighbor

gene id symbol gene type direction distance location
AMCG00001803 LOC107680460,LOC102314080 coding downstream 786 16167863 ~ 16170455 (-)
AMCG00001810 NA coding downstream 22666 16146837 ~ 16148575 (-)
AMCG00001808 yipf4,LOC106606648 coding downstream 50905 16115193 ~ 16120336 (-)
AMCG00001809 LOC106606575 coding downstream 57128 16066284 ~ 16114113 (-)
AMCG00001798 birc6 coding downstream 125584 16030594 ~ 16045657 (-)
AMCG00001802 LOC107675669 coding upstream 631 16177185 ~ 16197496 (-)
AMCG00001804 tubb4b,tbb2c,LOC105023713,LOC105029894,LOC106575097,LOC107693853 coding upstream 96774 16273328 ~ 16279392 (-)
AMCG00001816 grem2,grem2b,LOC107570400,LOC107746751,LOC107659701 coding upstream 458910 16635464 ~ 16644981 (-)
AMCG00001817 rgs7 coding upstream 469373 16645927 ~ 16678629 (-)
AMCG00001827 fh coding upstream 547921 16724475 ~ 16732575 (-)
G160387 fbxo28,LOC106576958 non-coding downstream 374883 15791996 ~ 15796358 (-)
G160319 NA non-coding downstream 560525 15603843 ~ 15610716 (-)
G160311 NA non-coding downstream 575886 15594607 ~ 15595355 (-)
G160132 NA non-coding downstream 1607736 14559152 ~ 14563505 (-)
G160094 NA non-coding downstream 1677592 14491898 ~ 14493649 (-)
G160538 NA non-coding upstream 57861 16234415 ~ 16235803 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding upstream 138773 16315327 ~ 16315563 (-)
G160631 NA non-coding upstream 640385 16816939 ~ 16817195 (-)
G160640 NA non-coding upstream 678099 16854653 ~ 16854957 (-)
G160682 NA non-coding upstream 798894 16975448 ~ 16975879 (-)
AMCG00001791 fam98a other downstream 337435 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 468741 15691569 ~ 15702500 (-)
G160255 NA other downstream 650602 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 669448 15499553 ~ 15501793 (-)
AMCG00001756 NA other downstream 1600314 14550689 ~ 14570927 (-)
AMCG00001843 NA other upstream 914799 17091353 ~ 17092549 (-)
G160817 NA other upstream 1354312 17530866 ~ 17531990 (-)
AMCG00001865 NA other upstream 1631464 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 1683585 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 1732200 17908754 ~ 17910853 (-)

Expression


Co-expression Network