AMCG00001810


Basic Information

Item Value
gene id AMCG00001810
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16146837 ~ 16148575 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001810
ATGCCTCCTTCTGACAGAATACGGCAGccTGAAGACAATGGGAGCTTTTTATCAGAAACAACACAAGACTTCTTCAAAAGATTCGAGAGCTCCTGCGAGAGTTGCTATTGCTCGGTCCCCCCACCCAAGATCAGCGACCTCATGAACGACGAAGACTTGCTGTACTTCCTGCGACTAAAGCTGGACCCCAACTACTCGACCATCAAGAACTGGAAGAACTTTGCCAGCAAGTGGGGCATGACTTACGACGAACTGAATTTCCTGGAGCACCGGACTCAGGGCTCCACCCACAGCCCCACCCAGGAGTTCTTGCAACGAAACAACGAGAAGACGGTCAAGGAGCTGACCGACCTGTGCATCACATACCAGAGGATCGACGTCCTCCGAAAACTACAGAAGTGGGTGGAGAAAGACTGGCCAAAACGATGGCAAAAAGCACATTAA

Function

GO: NA

KEGG:

id description
K23324 EDARADD; ectodysplasin-A receptor-associated adapter protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001810 True 444 mRNA 0.51 3 16146837 16148575

Neighbor

gene id symbol gene type direction distance location
AMCG00001808 yipf4,LOC106606648 coding downstream 26501 16115193 ~ 16120336 (-)
AMCG00001809 LOC106606575 coding downstream 32724 16066284 ~ 16114113 (-)
AMCG00001798 birc6 coding downstream 101180 16030594 ~ 16045657 (-)
AMCG00001796 NA coding downstream 121434 16018913 ~ 16025403 (-)
AMCG00001795 NA coding downstream 155579 15967103 ~ 15991258 (-)
AMCG00001803 LOC107680460,LOC102314080 coding upstream 19288 16167863 ~ 16170455 (-)
AMCG00001801 NA coding upstream 22666 16171241 ~ 16176554 (-)
AMCG00001802 LOC107675669 coding upstream 28610 16177185 ~ 16197496 (-)
AMCG00001804 tubb4b,tbb2c,LOC105023713,LOC105029894,LOC106575097,LOC107693853 coding upstream 124753 16273328 ~ 16279392 (-)
AMCG00001816 grem2,grem2b,LOC107570400,LOC107746751,LOC107659701 coding upstream 486889 16635464 ~ 16644981 (-)
G160387 fbxo28,LOC106576958 non-coding downstream 350479 15791996 ~ 15796358 (-)
G160319 NA non-coding downstream 536121 15603843 ~ 15610716 (-)
G160311 NA non-coding downstream 551482 15594607 ~ 15595355 (-)
G160132 NA non-coding downstream 1583332 14559152 ~ 14563505 (-)
G160094 NA non-coding downstream 1653188 14491898 ~ 14493649 (-)
G160538 NA non-coding upstream 85840 16234415 ~ 16235803 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding upstream 166752 16315327 ~ 16315563 (-)
G160631 NA non-coding upstream 668364 16816939 ~ 16817195 (-)
G160640 NA non-coding upstream 706078 16854653 ~ 16854957 (-)
G160682 NA non-coding upstream 826873 16975448 ~ 16975879 (-)
AMCG00001791 fam98a other downstream 313031 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 444337 15691569 ~ 15702500 (-)
G160255 NA other downstream 626198 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 645044 15499553 ~ 15501793 (-)
AMCG00001756 NA other downstream 1575910 14550689 ~ 14570927 (-)
AMCG00001843 NA other upstream 942778 17091353 ~ 17092549 (-)
G160817 NA other upstream 1382291 17530866 ~ 17531990 (-)
AMCG00001865 NA other upstream 1659443 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 1711564 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 1760179 17908754 ~ 17910853 (-)

Expression


Co-expression Network