AMCG00001829


Basic Information

Item Value
gene id AMCG00001829
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16797565 ~ 16797975 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001829
ATGCTGCCTGTCTGGCTTGACCTGCCTCTGGACCAGCCATTTGACATTGAGAGGACGCACAGATCCTCAGGACAGAGACCAGGAGCTAACCAGAGACCGAGGAGCATCGTGGTTCGCTTTCTGAGAGACCTTGACAAGGAGGCTATCCTGAATGCTTTCAGAATTGAACGTGAGGTACTACACAAGGGCTCAAGGCTGCCGTGTTTCAAGGCCTGTCCGCGGAGGTGCCGCGCAAGAGGAGAGATCTGGCAGCGGAGAGGAGAAAGCTCACCGGTCTTGGGGTTTTCAGGGGCTTGGCCTGTCCAGCTAAACTTCAAATTCTGGACAAGGGGAGGATTAGAGTTTGAAACATCAGCCACGGCCACCGAGTTCCTGGGAGTTGGAAAGCCGTCCTGTGGATCCCCCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001829 True 411 mRNA 0.55 1 16797565 16797975

Neighbor

gene id symbol gene type direction distance location
AMCG00001826 NA coding downstream 18992 16772176 ~ 16778573 (-)
AMCG00001827 fh coding downstream 64990 16724475 ~ 16732575 (-)
AMCG00001817 rgs7 coding downstream 118936 16645927 ~ 16678629 (-)
AMCG00001816 grem2,grem2b,LOC107570400,LOC107746751,LOC107659701 coding downstream 152584 16635464 ~ 16644981 (-)
AMCG00001804 tubb4b,tbb2c,LOC105023713,LOC105029894,LOC106575097,LOC107693853 coding downstream 518173 16273328 ~ 16279392 (-)
AMCG00001828 NA coding upstream 41419 16839394 ~ 16840260 (-)
AMCG00001822 NA coding upstream 101985 16899960 ~ 16905437 (-)
AMCG00001823 polr1b coding upstream 153546 16951521 ~ 16959906 (-)
AMCG00001821 ttl coding upstream 162490 16960465 ~ 16968616 (-)
AMCG00001832 NA coding upstream 179348 16977323 ~ 16990978 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding downstream 482002 16315327 ~ 16315563 (-)
G160538 NA non-coding downstream 561762 16234415 ~ 16235803 (-)
G160387 fbxo28,LOC106576958 non-coding downstream 1001207 15791996 ~ 15796358 (-)
G160319 NA non-coding downstream 1186849 15603843 ~ 15610716 (-)
G160311 NA non-coding downstream 1202210 15594607 ~ 15595355 (-)
G160631 NA non-coding upstream 18964 16816939 ~ 16817195 (-)
G160640 NA non-coding upstream 56678 16854653 ~ 16854957 (-)
G160682 NA non-coding upstream 177473 16975448 ~ 16975879 (-)
G160783 NA non-coding upstream 610236 17408211 ~ 17408617 (-)
G160842 NA non-coding upstream 804106 17602081 ~ 17604562 (-)
AMCG00001791 fam98a other downstream 963759 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 1095065 15691569 ~ 15702500 (-)
G160255 NA other downstream 1276926 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 1295772 15499553 ~ 15501793 (-)
AMCG00001756 NA other downstream 2226638 14550689 ~ 14570927 (-)
AMCG00001843 NA other upstream 293378 17091353 ~ 17092549 (-)
G160817 NA other upstream 732891 17530866 ~ 17531990 (-)
AMCG00001865 NA other upstream 1010043 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 1062164 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 1110779 17908754 ~ 17910853 (-)

Expression


Co-expression Network