AMCG00001830 (fbln7,LOC106589727)


Basic Information

Item Value
gene id AMCG00001830
gene name fbln7,LOC106589727
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16995655 ~ 17008469 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001830
CGCGATTCAGCGCTGCCGGGTGTTGGTGGGAGGGATCACATCCAGCGGTCCTGGGAGTCGGAGCGCATTAGGTAGCAGCCCCGCATTGCCCTGCCTCCCGCAACCCGAGGACGAGGCGCAGCATCCCGCGGAGTGGAGCATCACCCCTGGCACTGCTGATCACCGACCCACAGACGTCTTGCTACTCAGTAAACTATTCATGCATTGACTCGCACTGGTTTCCGAGCAGATCCCAACAGACACAGACCGTCGCACAAGGGGAGCAATAAGGCGCAACTCTGCGAGGATGAGCGCCGCGGTGCCGTGCagctgcctgctgctgctgtgtctgaCAGCGGTGCACCAGTCCCGGGCAGCGCAGAACTGCGTGGACAAGCACCATATTGTGACTGTGATCCGTCAGATGGAAAAGTTCTTGAAAGGGCAGGAAACGCGGTTTGCTGAGGGGCTGCGCATTATGAAATCCAAACTGGCGGCTCTGCAGAACTCGGTGTCCAAGTTCCCGGCATCAGAGCCACACGCAGTCACGTGTCCACCGCTGGAGGCTCCACCACACGGCAGGAAGTTCGGATCCAAGTACTTTCTGGGTCACGAGGTTCACTTCGCCTGCAATTCGGGGTATCATCTGGTGGGGGCGGGCACCAGGGTGTGTCAGGAAAACGGCAGCTGGACCGGCATGAATTCTGTCTGTAAAGACGTGAGCGAGTGTGCCAGCAATCCCTGCCAGAACGGAGGCAGCTGTGTGGAAGGGGTCAACCAGTACAAGTGCACGTGTCCCCAGAACTGGAGCGGCTCCCACTGCCAGCACCAGACGCAGACAGCCCCCCCCGAGTGGAGCGTAATGAACGACCCCGCCTTCAGCAGGAAGCCACGCTGCGCCAAAGTGGACCGGGCCCAGCACTGCAGCTGTGACGCCGGCTTCCACATGAGCGGCACCTCGGACAACAGCATCTGCCAGGATGTGAACGAGTGCGAGGTGTACAAGCAGGACGGGGCGGCCAGACTCTGCATGCACGCCTGTGTCAACATTCCCGGCTCGTACCACTGCTCCTGCCCAACTGGATACCGACTGCTGGCTGACGGACGGAGTTGCGAGGATGTGGATGAGTGCCTCGCCCAGCAGCACAACTGTACACGGGGGACGACCTGCATCAACACGGGAGGAGGGTTCCAGTGCGTCAACCCCGAGTGCCCCAAATCCCACGGCAACATCAGCTACGTGAAGACGTCACCGTTCCAGTGTGAACGCAACCCCTGCCCCATGGAGAGCCGATCGTGCCACCTGGCCCCCAAGACCGTGTCCTTCCACTACCTCTCACTGCCCTCCGACCTGCAGACCCCGGTCACGCTGTTCCGCATGGCCACGGCGGCGGCCCCGGGCAGGCCCGGCCCGGACAGCCTGCGCTTCGGCATCGTGGGCGGCAATGGCCGGGGCCACTTCGTCATGCAGCGCTCCGACCGGCAGACGGGCGAGCTCATCCTGGTGCAGCGGCTGCGCGGCCCCCAGGAGACGGAGGTGGAGGTGGACATGTCCGAGTACCTGGAGCGCACCTTCCAGGCCAAGCACGTGTCCAAGGTCACCGTCTTCGTCTCCCCCCATGAGTTTTGAGAGCGGACCAGGTTCTCTTGTCGTAGGCATCATCGGGGACCCCTCGGCAGCTCTGAGATGTATTTTTATGGCCTAGTGGTGCCCatctctggtcctggagggccacagatCCGCATGGGTATTTAGGtaataacaaatcaataataaatgaaaacataacgCTTGATTTGTGCTAGTAAACCGATATCTGGTTCAGTTAAGTAACAAGAGAGATTAGTTGGATGAAATCCCAGGATGCCCTGctgtcctccaggaccagaacAGTCCATCACATTGCCAGACGATTGAAAACGGCTCTCTTGTGCCTTTCTAATGAAGTGCATATTGCGACGTGTTTCCGGAGGCTTTTATCGCACTCCAAGGGAGCCGGCCCAGAAAAACACGACCATCCGTTCCACCGGAActaaaatggaaagaaatagATTATAGGACTTTGAAGCAGGGAGTAGAATAGGAAACCTGACCTTCCCCCCGCCCATCGTCTGGTTTCCACAGGGTTTTGAAAAAAGACTATTTTGTCCGATCACTCGTACTTAGTGGATAGAGTTgataatgcaaatattaaatgaatgtaatattAACAGAGGATGGAGGGACATTTATTCTTTGAGCAGCTTGGGCTTTGAAAAGGCTTGGCGTTCCTATCCTGGTTGGGCACTGCGGTCGGTAGATCGGTGAACTACTGGAATACAGATCAGATTGAATTTGGCTGTATGTCTAATTGGAAAAGGTGttcagagagaaagaaggaacaGAATTAGTCTTTATTCACCTCTGTTGAGTGTAGCGATCCTGTgtgtatgttcttatgtatgctggcttcttttttttttccttttgtacaTGACCAATACCTAAACTTTATTCGGGTTCAGGTAATCTTGGGATATTAAGaggtatattttttcttaaggtGATATACTTCAGGCTTTTAGTAGTCTTGGGTACATTTCTGTAATACTCCCTTAAGATGTTATTTATATGATGCCCTTGCTATTACAGCACCCAGGTGCAGCTTTGGTTATTTAAAAGGAACTTAATTACCCAACCTGTAATACAGTGCTTTAGACATATCTGTTTTCCTTTATATTGcacataaaatgttttaaaatgaaataaaggttAAGATCTGACATTA

Function

symbol description
fbln7 Predicted to enable calcium ion binding activity. Is expressed in mandibular arch skeleton; notochord; and pharyngeal arch.

NR:

description
PREDICTED: fibulin-7-like isoform X2

GO: NA

KEGG:

id description
K17342 FBLN7; fibulin 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001830 True 2747 mRNA 0.54 8 16995655 17008469

Neighbor

gene id symbol gene type direction distance location
AMCG00001819 NA coding upstream 18695 16969820 ~ 16976960 (+)
AMCG00001818 NA coding upstream 44144 16946524 ~ 16951511 (+)
AMCG00001820 NA coding upstream 97847 16870396 ~ 16897808 (+)
AMCG00001824 NA coding upstream 126336 16865490 ~ 16869319 (+)
AMCG00001825 NA coding upstream 173829 16816976 ~ 16821826 (+)
AMCG00001831 sft2d1 coding downstream 47012 17055481 ~ 17066501 (+)
AMCG00001836 NA coding downstream 61413 17069882 ~ 17070658 (+)
AMCG00001837 NA coding downstream 65747 17074216 ~ 17092598 (+)
AMCG00001839 t,LOC102777203 coding downstream 86095 17094564 ~ 17098333 (+)
AMCG00001838 pde10a coding downstream 135772 17144241 ~ 17160791 (+)
G160649 NA non-coding upstream 85622 16905249 ~ 16910033 (+)
G160648 NA non-coding upstream 93215 16899895 ~ 16902440 (+)
G160542 tubb4b,LOC106575097,LOC105893757 non-coding upstream 717601 16276806 ~ 16278054 (+)
G160464 NA non-coding upstream 876389 16117205 ~ 16119266 (+)
G160463 NA non-coding upstream 880956 16114344 ~ 16114699 (+)
G160782 NA non-coding downstream 399788 17408257 ~ 17408616 (+)
G160869 NA non-coding downstream 789730 17798199 ~ 17804178 (+)
G160895 NA non-coding downstream 851693 17860162 ~ 17861427 (+)
G160910 NA non-coding downstream 908326 17916795 ~ 17917054 (+)
G160939 NA non-coding downstream 1015727 18024196 ~ 18029816 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other upstream 617795 16237262 ~ 16377860 (+)
AMCG00001762 NA other upstream 1556624 15432337 ~ 15439031 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other upstream 1661075 15331620 ~ 15334580 (+)
G160026 NA other upstream 2725465 14269615 ~ 14270190 (+)
AMCG00001691 NA other upstream 4661955 12329979 ~ 12333700 (+)
AMCG00001841 NA other downstream 171125 17179594 ~ 17182601 (+)
AMCG00001846 NA other downstream 408882 17417351 ~ 17462934 (+)
AMCG00001881 NA other downstream 1179433 18187902 ~ 18209391 (+)
AMCG00001883 NA other downstream 1201540 18210009 ~ 18217138 (+)
AMCG00001880 NA other downstream 1655526 18663995 ~ 18673815 (+)

Expression


Co-expression Network