AMCG00001835


Basic Information

Item Value
gene id AMCG00001835
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 17022848 ~ 17041994 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001835
TGAGCGCCTGCGCCACAGGCTGCTCCCCCAGAACCGTCCAGTGTGTGGACAGCCCGGTCCAGTAGGCTCTAGAGCTGTCCAGGCTGCCGGACTGTCCCGTTAAAGTCTCCCTCGACCCGATGGTGGATAAAATGAGCCGCGGAGGGTCCTGTCGGAGTCCTGGGATTACTTTGCTAGAACTGCTCTTAGTTTATGGCGTCCTGACAGCGGGGACTGTGGACCTCACTGCCGGGTCGTCTCCTGACGCAACGCAGCCGCCACCCACCCTGGAGCCCCCGGTGGTGACCGAGAGGGCCCCCAAGGTCCACTTAAACCAGGAGGACATTAAGAGGCTGCGGTTCAAGCCCACGGTGGGGGAGATCCAGGCCTCGGAGGGGACAGAGGTGAAGGTGAACTGCTCCATCGATATCCACAGCGTGCTGCTGGACCTGCACATCCAGTGGTGGAAGGATGGGGTGGAGCTGGCGGGCAGCCAGCAGGCCATGCTCAACGACCTGCAGACCACGGACAAGGGGGTGTCCACCCTGAGCATCAAGAAGGTGCAGCGCTCTGATGGCGGGGACTACTGGTGCCGACTCAACGTCAGCGGCACGCTGATCGAGTCCGATCACATCCAGATACAAGTCGAAGGGTTGCCAATGTTCATTAAAGAGCCAGAGGCACTGAACGTCACGAGGAACACCAGTTTCACCCTGACCTGTGAGGCGGTCGGCCCCCCGGACCCAGTCACCATCATCTGGATGCGCAACGAAGTGAAGATCTCCTCCTCCTCGCAGCTCTCCCCTTCGAGCTTCACTCAGCCAGGTATCGACGAGCCGACGCGGTTCAGTTGCGAAGCGCACAACGGCAGGGGATTGACCACATCCAGGGTAACGCAGGTTAACGTTAAAGAAGCCCCTTCACCCCCCGCTGACCTGTATGTCGCTGACCAGGCCGCTCACAGCCTCCTGCTCAAGTGGACCCCTGGACATGACGGTTTCTCTCCCCTGAGCGCCTGCGAAGTTAGACACAGAGTGACCGGCCTGCGGGCCCTGAGCTCATACAACATGAGTGTGTCCTGCAGGAATGAGATTGGATGGTCTCCGTCCAGCTCCTGGGTTCAAGGCACAACAACAGAGGGAGTGCCGTCGGTGCCCCCCCACGACGTCCACTTGCAACTCAACGACTCGGTGCTGGTGGTGACATGGAAGAGCCCCACCCCAGAGATGATGAACGGAGTCTGGCTCGGTTACAAAGTCAACATCACGCACCAGGAGCCAATATCCACCaTGGACAATGTACTTTCCATCCCATTGAAAGCTTTCAACATGACCTACAGTGTCCAGGTGGCTGCGTTCACCAGGTCGGGGACTGGGCCTCTTAGTGACCCTCAACAGATATTCGTACACGAGCCCGATGTGAGACTGGCTCCGTCGTCCAGCCCGTATACGAGGAGCTCGGAGTCCGTTTACATCGTGCTGGGCGTGGTGTGCGGCATCTGTCTGGTCTTGCTCATCTCCTACTTGGTTATCTGTGTCCGGAACAGGACCACGGAGAACCAATTCGGTTTTATACTctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001835 True 1559 mRNA 0.59 11 17022848 17041994

Neighbor

gene id symbol gene type direction distance location
AMCG00001833 tmem87b,LOC107688162,LOC107597636,LOC107585411 coding downstream 2010 17011476 ~ 17020838 (-)
AMCG00001832 NA coding downstream 31870 16977323 ~ 16990978 (-)
AMCG00001821 ttl coding downstream 54232 16960465 ~ 16968616 (-)
AMCG00001823 polr1b coding downstream 62942 16951521 ~ 16959906 (-)
AMCG00001822 NA coding downstream 117411 16899960 ~ 16905437 (-)
AMCG00001834 NA coding upstream 1724 17043718 ~ 17054044 (-)
AMCG00001844 NA coding upstream 111509 17153503 ~ 17154866 (-)
AMCG00001842 LOC106512626 coding upstream 123838 17165832 ~ 17182616 (-)
AMCG00001845 LOC107739475,LOC107565601,LOC107728072 coding upstream 174416 17216410 ~ 17233305 (-)
AMCG00001855 NA coding upstream 531666 17573660 ~ 17580861 (-)
G160682 NA non-coding downstream 46969 16975448 ~ 16975879 (-)
G160640 NA non-coding downstream 167891 16854653 ~ 16854957 (-)
G160631 NA non-coding downstream 205653 16816939 ~ 16817195 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding downstream 707285 16315327 ~ 16315563 (-)
G160538 NA non-coding downstream 787045 16234415 ~ 16235803 (-)
G160783 NA non-coding upstream 366217 17408211 ~ 17408617 (-)
G160842 NA non-coding upstream 560087 17602081 ~ 17604562 (-)
G160903 NA non-coding upstream 824022 17866016 ~ 17866221 (-)
G160928 NA non-coding upstream 873424 17915418 ~ 17915691 (-)
G160944 NA non-coding upstream 996710 18038704 ~ 18039374 (-)
AMCG00001791 fam98a other downstream 1189042 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 1320348 15691569 ~ 15702500 (-)
G160255 NA other downstream 1502209 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 1521055 15499553 ~ 15501793 (-)
AMCG00001756 NA other downstream 2451921 14550689 ~ 14570927 (-)
AMCG00001843 NA other upstream 49359 17091353 ~ 17092549 (-)
G160817 NA other upstream 488872 17530866 ~ 17531990 (-)
AMCG00001865 NA other upstream 766024 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 818145 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 866760 17908754 ~ 17910853 (-)

Expression


Co-expression Network