AMCG00001857


Basic Information

Item Value
gene id AMCG00001857
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 17583457 ~ 17584485 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001857
ATGGAGGCAGTCGTGGTGTcgggcggcggcggcggcagaGACGATACGGACACGACCGCCAGAGCTAAAGTCCCGGAGAGGCTGCTGAGGAGGGACCAGGCCCGGCAGGACGACGTGGAGAAGCGCAAGGAGGTCAAGGAGAGCCAGACGGTCACGGAGGAGAAGAGCGACTTCTTCACCAGCGCGTTCAACAAGGAGAAGGCGGCCATTGAGGAGCTGCTGTCGAGCTGCGGGGAGGCGGAGCGGGGCCGGGTGGCGGGCCTGCTGGAGGAGATCAGCGCCCGGATCCAGCAGCTGCAGAAGTTCCTCACCGACAGCGTGGTGTTCCTGGTGCAGTACGAGGTGCGGCAAGCGCAGGCGGCCCTGCAGAGGCTGCAGGCCGCGCTGGACGACAGGAGGGACGAGCTGCTGCCCAAGAAGAAGTTTGCCTTCCGCTCTCGCACCGCCGCGCCGGGCAAGAGCAAGCAGCCCGCGGTTGCTAAAGAGGAGGAGGCTCCAGAGACGGAGGTCGTGGATGGGGTGCCGCCCGCCGAGCAGTGCGGCTTCTCCAACGCGGAGCATCAGGTGCTGATCAAGAGCGGCGACGAGATCCGCCAGACGGACGTCCTGCTGACGCACCTGTCCCACTGCAAGGTGCGGCTGCTCGGCGCCCCCAGCACGCTGCACATCAAGCACGTCCGCGACTCGGAGATCCTGTGCGGGCCGGTGTCCAGCTCCGTGTTCATGGACCACTGCTCCGGCTGCACCGTGGCCGTGCCCTGCCAGCAGCTGCGCACGCACAACACCACCGACACCCGGGTGTACCTGCACGTCACCAGCCGGGGCATCATCGAGGACTGCAGCGGGGTGCGGGTGGCGCCCTTCAGCTGGAGCTACCCGGGCATCGAGGCGGACTTCGAGGTCTCCGGGTTGGACCGAGAGAAAAACAACTGGACGCAAGTGGACGATTTTAACTGGCTGGCCTTCGACACGCCCTCGCCCAACTGGAGCATCCTTCCCGAAAACGAGAGGAAGTCCGACTGggactga

Function

GO: NA

KEGG:

id description
K21766 TBCC; tubulin-specific chaperone C

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001857 True 1029 mRNA 0.66 1 17583457 17584485

Neighbor

gene id symbol gene type direction distance location
AMCG00001855 NA coding downstream 2596 17573660 ~ 17580861 (-)
AMCG00001845 LOC107739475,LOC107565601,LOC107728072 coding downstream 350152 17216410 ~ 17233305 (-)
AMCG00001842 LOC106512626 coding downstream 400841 17165832 ~ 17182616 (-)
AMCG00001844 NA coding downstream 428591 17153503 ~ 17154866 (-)
AMCG00001834 NA coding downstream 529413 17043718 ~ 17054044 (-)
AMCG00001864 kcng3,LOC108273984,LOC107756869,LOC107590001,LOC107758134 coding upstream 289058 17873543 ~ 17879017 (-)
AMCG00001869 NA coding upstream 345633 17930118 ~ 17936656 (-)
AMCG00001867 NA coding upstream 354428 17938913 ~ 17946511 (-)
AMCG00001871 NA coding upstream 544229 18128714 ~ 18130167 (-)
AMCG00001870 NA coding upstream 550612 18135097 ~ 18187983 (-)
G160783 NA non-coding downstream 174840 17408211 ~ 17408617 (-)
G160682 NA non-coding downstream 607578 16975448 ~ 16975879 (-)
G160640 NA non-coding downstream 728500 16854653 ~ 16854957 (-)
G160631 NA non-coding downstream 766262 16816939 ~ 16817195 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding downstream 1267894 16315327 ~ 16315563 (-)
G160842 NA non-coding upstream 17596 17602081 ~ 17604562 (-)
G160903 NA non-coding upstream 281531 17866016 ~ 17866221 (-)
G160928 NA non-coding upstream 330933 17915418 ~ 17915691 (-)
G160944 NA non-coding upstream 454219 18038704 ~ 18039374 (-)
G161030 NA non-coding upstream 677759 18262244 ~ 18346022 (-)
G160817 NA other downstream 51467 17530866 ~ 17531990 (-)
AMCG00001843 NA other downstream 490908 17091353 ~ 17092549 (-)
AMCG00001791 fam98a other downstream 1749651 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 1880957 15691569 ~ 15702500 (-)
G160255 NA other downstream 2062818 15504311 ~ 15520639 (-)
AMCG00001865 NA other upstream 223533 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 275654 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 324269 17908754 ~ 17910853 (-)
G161153 NA other upstream 1251297 18835782 ~ 18850884 (-)
AMCG00001945 NA other upstream 2755940 20340425 ~ 20347505 (-)

Expression


Co-expression Network