AMCG00001865


Basic Information

Item Value
gene id AMCG00001865
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 17808018 ~ 17810097 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001865
CGGGAGGCCGCTTCCTCTGAGGGCGGCTCATTTCTTTGCCCAATTAGTGGGACTCGTGAAAATGGTCACAATTCTAAGTGCAAAGAGGTCGCATTTCAGATAATTTTCGCCAGAACGTTCTGTACAAATTGTCGAACACATACTGTAGATGGGAAGAACATtcaacaaaagcacacaaaacacacgACTGCCCGCTCTGTCTTGGGTGtcactgtttgttttgggtGAACCTCAgggtgtgtgcgtctgtgtgtgtgggagtccACAGGGCTGTATATAAACTGTGCCAGCCCGTGTGAAGGGTAGATACTTTGAACTACACCAAGATGAAGGCTTTTCtggtcctgctgctgctgctgccgttGTGCACAGCTTTTACTATCGAGTGCTATGGGGAAGATTTCCTGATGGTACAGAACCAGCTGCTCCGGTGCTCCAGTCGAGTTCCCCAGGTCTGCTACACTAGAGAAACTGGGGAGAAAGGCTGCACTACGCTGGCCTTCTGCAAGCATCCCGGCTGGAAATGCTGTGATACCAACCGCTGCAATGCCTGAGCTGCCAACCCTGCCCAGCCTGGGACTCTCCCAGTGGG
>TU202538
AAGAGGTCGCATTTCAGATAATTTTCGCCAGAACGTTCTGTACAAATTGTCGAACACATACTGTAGATGGGAAGAACATtcaacaaaagcacacaaaacacacgACTGCCCGCTCTGTCTTGGGTGtcactgtttgttttgggtGAACCTCAgggtgtgtgcgtctgtgtgtgtgggagtccACAGGGCTGTATATAAACTGTGCCAGCCCGTGTGAAGGGTAGATACTTTGAACTACACCAAGATGAAGGCTTTTCtggtcctgctgctgctgctgccgttGTGCACAGCTTTTACTATCGAGTGCTATGGGGAAGATTTCCTGATGGTACAGAACCAGCTGCTCCGGTGCTCCAGTCGAGTTCCCCAGGTCTGCTACACTAGAGAAACTGGGGAGAAAGGCTGCACTACGCTGGCCTTCTGCAAGCATCCCGGCTGGAAATGCTGTGATACCAACCGCTGCAATGCCTGAGCTGCCAACCCTGCCCAGCCTGGGACTCTCCCAGTGGGCAGCTGGGGGTACAGACACTGCTGGCA

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001865 True 592 mRNA 0.52 3 17808045 17810097
TU202538 False 537 lncRNA 0.53 3 17808018 17810015

Neighbor

gene id symbol gene type direction distance location
AMCG00001857 NA coding downstream 223533 17583457 ~ 17584485 (-)
AMCG00001855 NA coding downstream 227157 17573660 ~ 17580861 (-)
AMCG00001845 LOC107739475,LOC107565601,LOC107728072 coding downstream 574713 17216410 ~ 17233305 (-)
AMCG00001842 LOC106512626 coding downstream 625402 17165832 ~ 17182616 (-)
AMCG00001844 NA coding downstream 653152 17153503 ~ 17154866 (-)
AMCG00001864 kcng3,LOC108273984,LOC107756869,LOC107590001,LOC107758134 coding upstream 63446 17873543 ~ 17879017 (-)
AMCG00001869 NA coding upstream 120021 17930118 ~ 17936656 (-)
AMCG00001867 NA coding upstream 128816 17938913 ~ 17946511 (-)
AMCG00001871 NA coding upstream 318617 18128714 ~ 18130167 (-)
AMCG00001870 NA coding upstream 325000 18135097 ~ 18187983 (-)
G160842 NA non-coding downstream 203456 17602081 ~ 17604562 (-)
G160783 NA non-coding downstream 399401 17408211 ~ 17408617 (-)
G160682 NA non-coding downstream 832139 16975448 ~ 16975879 (-)
G160640 NA non-coding downstream 953061 16854653 ~ 16854957 (-)
G160631 NA non-coding downstream 990823 16816939 ~ 16817195 (-)
G160903 NA non-coding upstream 55919 17866016 ~ 17866221 (-)
G160928 NA non-coding upstream 105321 17915418 ~ 17915691 (-)
G160944 NA non-coding upstream 228607 18038704 ~ 18039374 (-)
G161030 NA non-coding upstream 452147 18262244 ~ 18346022 (-)
G161039 NA non-coding upstream 490987 18301084 ~ 18304098 (-)
G160817 NA other downstream 276028 17530866 ~ 17531990 (-)
AMCG00001843 NA other downstream 715469 17091353 ~ 17092549 (-)
AMCG00001791 fam98a other downstream 1974212 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 2105518 15691569 ~ 15702500 (-)
G160255 NA other downstream 2287379 15504311 ~ 15520639 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 50042 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 98657 17908754 ~ 17910853 (-)
G161153 NA other upstream 1025685 18835782 ~ 18850884 (-)
AMCG00001945 NA other upstream 2530328 20340425 ~ 20347505 (-)

Expression


Co-expression Network