AMCG00001896 (LOC104961215)


Basic Information

Item Value
gene id AMCG00001896
gene name LOC104961215
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 18886560 ~ 18888592 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001896
GAGGACTACGACCGCCTGAGGCCGCTGTCCTACCCGATGACTGATGTCTTCCTCATCTGCTTCTCCGTGGTGAACCCGGCCTCCTTCCAGAACGTGCGGGAGGAGTGGGTGCCGGAGCTGCGGGAGTATGCGCCGAGCGTGCCGTTCCTGCTCATCGGCACACAGGCGAGTCCCGAGATACGCTGCTTTGTCACAAACGCGAAGAAACGGGCCCTTCAGAGCTGCGGACGTTCCCGAGGGCTCGCTGCTAAATGGGGACTAACGGTTGTCATTTGTGCCCGTTCTCTTTTCCAGATCGACCTCCGGGACGACCCCAAGACCATAGCGAAGCTGAATGACATGAAGGAGAAGCCCATCGCCATAGAGCAGGGCCAGAAACTCGCCAAGGAGatcggCGCCTGCTGTTACGTGGAGTGCTCCGCCTTGACGCAGAAGGGGCTCAAGACGGTCTTCGACGAAGCCATCATCGCCATCCTCACCCCGAAGAAGAACGCGCTGAAGAGGCGGCTGGGCTCCCGCTGCATCAACTGCTGCCTGATCACGTGA

Function

NR:

description
PREDICTED: rho-related GTP-binding protein RhoQ-like, partial

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001896 True 546 mRNA 0.60 3 18886560 18888592

Neighbor

gene id symbol gene type direction distance location
AMCG00001898 rhoq,LOC105900041 coding upstream 8863 18869836 ~ 18877697 (+)
AMCG00001895 NA coding upstream 35575 18830179 ~ 18850985 (+)
AMCG00001897 prkcea,LOC107739250,LOC107582770,LOC107550054,LOC107698816 coding upstream 82648 18789766 ~ 18803912 (+)
AMCG00001886 NA coding upstream 107876 18771080 ~ 18778684 (+)
AMCG00001888 prkcea,prkce,LOC107582817,LOC108274197,LOC107739250 coding upstream 159478 18726699 ~ 18727082 (+)
AMCG00001894 NA coding downstream 51178 18939770 ~ 18941440 (+)
AMCG00001890 NA coding downstream 85114 18973706 ~ 18974812 (+)
AMCG00001899 NA coding downstream 91878 18980470 ~ 19012030 (+)
AMCG00001900 NA coding downstream 153137 19041729 ~ 19047551 (+)
AMCG00001908 NA coding downstream 195926 19084518 ~ 19087852 (+)
G160985 NA non-coding upstream 667529 18218764 ~ 18219031 (+)
G160943 NA non-coding upstream 847186 18038704 ~ 18039374 (+)
G160939 NA non-coding upstream 856744 18024196 ~ 18029816 (+)
G160910 NA non-coding upstream 969506 17916795 ~ 17917054 (+)
G160895 NA non-coding upstream 1025133 17860162 ~ 17861427 (+)
G161170 NA non-coding downstream 34857 18923449 ~ 18923672 (+)
G161282 NA non-coding downstream 566496 19455088 ~ 19457752 (+)
G161285 NA non-coding downstream 619651 19508243 ~ 19508522 (+)
G161392 NA non-coding downstream 1347585 20236177 ~ 20236391 (+)
G161469 NA non-coding downstream 1586079 20474671 ~ 20474889 (+)
AMCG00001880 NA other upstream 212745 18663995 ~ 18673815 (+)
AMCG00001883 NA other upstream 669422 18210009 ~ 18217138 (+)
AMCG00001881 NA other upstream 677169 18187902 ~ 18209391 (+)
AMCG00001846 NA other upstream 1423626 17417351 ~ 17462934 (+)
AMCG00001841 NA other upstream 1703959 17179594 ~ 17182601 (+)
AMCG00001889 cript,LOC107582781,LOC107728714 other downstream 10745 18899337 ~ 18901718 (+)

Expression


Co-expression Network