AMCG00001904


Basic Information

Item Value
gene id AMCG00001904
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19053730 ~ 19054245 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001904
ATGTACTGTCTTGGGAGGCTCTCTCCTGCTGCCCCGGCCGATAAGGAGCGGAAAGCGGCTCTGACAGCAGCCCGGCTCCGGTGTCCTGCGTGTAGCCAGCGCTGGCCCAGAGGTGTAGCTTTAACCAGCACCCAGAAAACCCTTGAATCTGTGCAAGCTGATCAACTGACAGAAGAGCAGATTGCTGGTCTGCTCTCTGACTGCCGGCTGTCCGGCCACCTCCCTGCCTGGTGGGCTGTTTCCCTTTTAAGGCCGGGCCCAGTTGTGACAGATGTTTATACACCGCACTGTCCCTCTGACCGAGGCGAAGGCATTGCACGGTGTCTGTGCATTGCATCGGGGCGATTTAGTGTTGAGTGGCTTGTGATGCGCAGGCTTTCGGATGCAGTCCAGTTTGTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001904 True 402 mRNA 0.58 3 19053730 19054245

Neighbor

gene id symbol gene type direction distance location
AMCG00001903 LOC107670363 coding downstream 1419 19050302 ~ 19052311 (-)
AMCG00001902 NA coding downstream 10883 19040453 ~ 19042847 (-)
AMCG00001891 mcfd2 coding downstream 74437 18975031 ~ 18979293 (-)
AMCG00001892 LOC108429343,LOC106589406 coding downstream 142790 18905195 ~ 18910940 (-)
AMCG00001893 pigf,LOC107550047,LOC107698824,LOC107749355 coding downstream 154731 18888451 ~ 18898999 (-)
AMCG00001906 NA coding upstream 84 19054329 ~ 19054625 (-)
AMCG00001905 NA coding upstream 500 19054745 ~ 19054972 (-)
AMCG00001901 NA coding upstream 10275 19064520 ~ 19078157 (-)
AMCG00001911 kcnk12,LOC107589351,LOC107679129 coding upstream 60518 19114763 ~ 19115644 (-)
AMCG00001912 kcnk12,LOC106515821 coding upstream 73017 19127262 ~ 19131079 (-)
G161165 cript,LOC107582781,LOC107728714 non-coding downstream 152012 18899147 ~ 18901718 (-)
G161161 NA non-coding downstream 166162 18886294 ~ 18887568 (-)
G161030 NA non-coding downstream 707708 18262244 ~ 18346022 (-)
G161039 NA non-coding downstream 749632 18301084 ~ 18304098 (-)
G160944 NA non-coding downstream 1014356 18038704 ~ 18039374 (-)
G161206 NA non-coding upstream 29867 19084112 ~ 19084976 (-)
G161302 NA non-coding upstream 400879 19455124 ~ 19457742 (-)
G161346 LOC107739892 non-coding upstream 1037868 20092113 ~ 20093345 (-)
G161391 NA non-coding upstream 1171412 20225657 ~ 20225919 (-)
G161475 NA non-coding upstream 1384223 20438468 ~ 20438673 (-)
G161153 NA other downstream 202846 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 1142877 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 1188351 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 1243633 17808018 ~ 17810097 (-)
G160817 NA other downstream 1521740 17530866 ~ 17531990 (-)
AMCG00001945 NA other upstream 1286180 20340425 ~ 20347505 (-)

Expression


Co-expression Network