AMCG00001910 (fbxo11,LOC107550041,LOC107749363,LOC108430631,LOC108413220,LOC107728720)


Basic Information

Item Value
gene id AMCG00001910
gene name fbxo11,LOC107550041,LOC107749363,LOC108430631,LOC108413220,LOC107728720
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19177265 ~ 19186120 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001910
ATGGTTGCAGAAGAATCCGGTCCAGGCGCACAGAACAGTCCCTACCAACTCCGCAGAAAGTCCCTGTTACCAAAGCGAACCGCGTGTCCCGCAAAGAACAGCATGGAGGGTGCTTCCACGTCCACAACAGAGAACTTCGGTCACCGTGCCAAGCGTGCACGAGTATCGGGCAAATCGCAGGACCTCCCGGCCGCCCCAGCGGAACAGTATCTCCAAGAGAAGCTCCCAGACGAGGTGGTGCTCAAGATATTCTCCTACCTGCTAGAGCAGGACCTGTGCCGGGCGGCCTGTGTGTGCAAGCGCTTCAGCGAACTGGCCAACGACCCCATCCTGTGGAAGCGGCTCTACATGGAGGTGTTCGAGTACACGCGCCCCATGATGCACCCCGAGCCGGGGAAGTTCTACCAGATCAACCCCGAGGAGTACGAGCAGCCGAACCCCTGGAAGGAGAGCTTCCAGCAGCTGTATAAAGGCGCGCACGTCAAACCCGGCTTCGCGGAGCATTTCTACAGCAACCCGGCCAGATACAAGGGCAGAGAGAACATGCTGTACTATGACACCATCGAGGACGCGCTGGGTGGCGTCCAGGAGGCGCACTTCGACGGGCTGATCTTCGTCCACTCGGGCATCTACACCGACGAGTGGATCTACATCGAGTCCCCCATCACGATGATTGGCGCAGCGCCGGGGAAAGTTGCGGACAAAGTCATCATCGAGAACACGAGGGACTCAACGTTCGTGTTCATGGAGGGGTCCGAGGACGCCTACGTGGGCTACATGACCATCCGGttCAACCCTGATGACAAGTCCGCCCAGCACCACAATGCGCACCACTGCCTGGAGATCACGGTCAACTGCAGCCCCATCATCGACCACTGCATCATCCGGAGCACGTGTACAGTGGGTTCGGCCGTGTGCGTCAGCGGCCAGGGCGCCTGTCCCACCATCAAGCACTGCAACATCAGCGACTGCGAGAATGTGGGGCTGTACATCACCGACCACGCACAGGGCTACTTCGAGAGCTGCAACATCCACCGGAACCGGATCGCGGGCTTCGAGGTGAAGGCCTACGCCAACCCCACGGTGGTGCGCTGCGAGATCCACCACGGCCAGACGGGCGGCATCTACGTGCACGAGAAGGGCCGGGGGCAGTTCATCGAGAACAAGATCTATGCAAACAACTTTGCGGGGGTTTGGATCACATCCAACAGCGACCCCACGATCAGGGGCAACGCCATCTTTAATGGCAACCAGGGGGGCGTTTACATATTTGGGGACGGAAGAGGCCTTATCGAGGGGAACGACATCTACGGCAACGCGCTGGCGGGCATCCAGATCCGGACGAACAGCTGCCCCATCGTGCGGCACAACAAGATCCACGACGGGCAGCACGGGGGCATCTACGTGCACGAGAAGGGCCAGGGCGTGATCGAGGAGAACGAGGTGTACAGCAACACGCTGGCCGGCGTCTGGGTGACCACGGGCAGCACGCCGGTGCTGCGGAGGAACCGGATACACAGCGGCAAGCAGGTGGGGGTGTACTTCTACGACAACGGCCATGGCGTGCTGGAGGACAACGACATCTACAACCACATGTACTCGGGGGTCCAGATCAGGACTGGAAGCAACCCCAAGATCCGAAGGAATAAAATCTGGGGGGGGCAGAACGGTGGCATCCTAGTTTACAACTCTGACAACGAGATCTTCGACAACGCCATGGCAGGGGTCTGGATTAAGACGGACAGCAACCCCACGCTGCGGAGAAACAAGATCCACGACGGCCGCGACGGCGGCATCTGCATCTTCAACGGCGGCCGAGGTCTGCTGGAGGAGAATGACATCTTCAGGAACGCTCAGGCCGGCGTCCTCATCAGCACCAACAGCCACCCGGTGCTGCGCAAGAACCGGATATTCGACGGCTTTGCGGCAGGTATCGAGATCACGAATCACGCCACCGCCACCCTGGAGGGCAACCAGATCTTCAACAACCGCTTCGGGGGGCTGTTCCTGGCGTCCGGAGTCAACGTCACGATGAAAGATAACAAAATCATGAACAATCAGGACGCCATCGAGAAGGCGGTGAGTCGGGGACAGTGCCTGTACAAGATCTCCAGTTACACCAGCTACCCCATGCATGACTTCTACAGGTGTCACACCTGCAACACAACAGACCGCAACGCCATTTGTGTGAACTGCATCAAGAAGTGCCATCAAGGGCATGATGTGGAGTTTATACGGCATGATAGGTTCTTCTGCGACTGTGGCGCCGGGACCCTGTCCAACCCCTGCACGTTAGCCGGAGAGCCGACGCACGACACGGACACGCTGTACGACTCGGCGCCGCCTATAGAATCGAACACGTTGCAGCACAACTGA

Function

symbol description
fbxo11 Enables protein-arginine N-methyltransferase activity. Involved in cellular protein modification process. Located in cytosol; nucleolus; and nucleoplasm.

NR:

description
PREDICTED: F-box only protein 11 isoform X3

GO: NA

KEGG:

id description
K10297 FBXO11; F-box protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001910 True 2376 mRNA 0.59 20 19177265 19186120

Neighbor

gene id symbol gene type direction distance location
AMCG00001912 kcnk12,LOC106515821 coding downstream 46186 19127262 ~ 19131079 (-)
AMCG00001911 kcnk12,LOC107589351,LOC107679129 coding downstream 61621 19114763 ~ 19115644 (-)
AMCG00001901 NA coding downstream 99108 19064520 ~ 19078157 (-)
AMCG00001905 NA coding downstream 122293 19054745 ~ 19054972 (-)
AMCG00001906 NA coding downstream 122640 19054329 ~ 19054625 (-)
AMCG00001914 NA coding upstream 101158 19287278 ~ 19299869 (-)
AMCG00001913 NA coding upstream 124918 19311038 ~ 19323661 (-)
AMCG00001916 LOC104952680,LOC108443646 coding upstream 273160 19459280 ~ 19460843 (-)
AMCG00001917 NA coding upstream 321877 19507997 ~ 19511624 (-)
AMCG00001918 NA coding upstream 329461 19515581 ~ 19519632 (-)
G161206 NA non-coding downstream 92289 19084112 ~ 19084976 (-)
G161165 cript,LOC107582781,LOC107728714 non-coding downstream 275547 18899147 ~ 18901718 (-)
G161161 NA non-coding downstream 289697 18886294 ~ 18887568 (-)
G161030 NA non-coding downstream 831243 18262244 ~ 18346022 (-)
G161302 NA non-coding upstream 269004 19455124 ~ 19457742 (-)
G161346 LOC107739892 non-coding upstream 905993 20092113 ~ 20093345 (-)
G161391 NA non-coding upstream 1039537 20225657 ~ 20225919 (-)
G161475 NA non-coding upstream 1252348 20438468 ~ 20438673 (-)
G161471 if3ei,eif3l,LOC106576896 non-coding upstream 1289808 20475928 ~ 20478231 (-)
G161153 NA other downstream 326381 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 1266412 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 1311886 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 1367168 17808018 ~ 17810097 (-)
G160817 NA other downstream 1645275 17530866 ~ 17531990 (-)
AMCG00001945 NA other upstream 1154305 20340425 ~ 20347505 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01180000_00676567_00695049 FBXO11A, FBXO11B, FBXO11 coding CI01180000 null 675388 ~ 695049 (-)