AMCG00001911 (kcnk12,LOC107589351,LOC107679129)


Basic Information

Item Value
gene id AMCG00001911
gene name kcnk12,LOC107589351,LOC107679129
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19114763 ~ 19115644 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001911
ATGACCACGCCCGCCACTGTGGCAGGCAAGGTGTTCCTGATCTTCTACGGGCTGCTGGGCTGCGCCGGCACCATCCTGTTCTTCAACCTGTTCCTGGAGCGCATCATCACCCTGCTGGCGGTCGTCATGAAGGCCATCCACGAGCGGCAGCTCCGGCGCAGTGGCATCCTGCCGCCCACCCTGCGCTCCACCTTCTCGGACCCGGGCAGCCTGGCGGGCTGGAAGCCCTCGGTGTACTACGTGATGCTGATCCTGGGCCTGTCTGCCATCGTGCTGTCCTGCTGCGCCTCAGCCATGTACGCGCCCGTGGAGGGCTGGAACTACGTGGACTCGCTCTACTACTGCTTCGTCACCTTCAGCACCATCGGCTTCGGGGATCTGGTGAGCAGCCAGAACGCCGTGTACGAGCACCAGGGCCTCTACCGGCTGGCCAACTTCCTCTTCATCCTCATGGGCGTCTGCTGCATCTACTCGCTCTTCAACGTCATCTCCATCGTCATCAAGCAGGTGCTCAACTGGATGCTGGCCAAGATGGGCTGCCTGTGCTGCCGCCGCTGCCACAAGCCAAATGCCTTCCTGGGCCGGCGCAACGCCATCACGCCGGGCTCGCGTCTGCGCCGGGGCCGCTTCTCGGCCGAGCGGGACGGGCCCTACGACAGCGACACGGACGGCCGGCGCCTCTCGGGGGAGATGATCTCCATGCGGGACCTCACGGCCTCCAACAAGGTCTCGCTGGCCATCATGCAGAAGCAGTTGTCGGAGACGGCCAACGGCTTCCCGCGCACCGTCACCTCCAGCTCGCGGCACAACGGCTTCTCGGGTGGCGTGGGGGCGTTGGCCATCATGAACAACCGGCTGGCCGAGACGAGCGACAGCAGGTAG

Function

symbol description
kcnk12 Orthologous to human KCNK12 (potassium two pore domain channel subfamily K member 12).

NR:

description
PREDICTED: potassium channel subfamily K member 12-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001911 True 882 mRNA 0.65 1 19114763 19115644

Neighbor

gene id symbol gene type direction distance location
AMCG00001901 NA coding downstream 36606 19064520 ~ 19078157 (-)
AMCG00001905 NA coding downstream 59791 19054745 ~ 19054972 (-)
AMCG00001906 NA coding downstream 60138 19054329 ~ 19054625 (-)
AMCG00001904 NA coding downstream 60518 19053730 ~ 19054245 (-)
AMCG00001903 LOC107670363 coding downstream 62452 19050302 ~ 19052311 (-)
AMCG00001912 kcnk12,LOC106515821 coding upstream 11618 19127262 ~ 19131079 (-)
AMCG00001910 fbxo11,LOC107550041,LOC107749363,LOC108430631,LOC108413220,LOC107728720 coding upstream 61621 19177265 ~ 19186120 (-)
AMCG00001914 NA coding upstream 171634 19287278 ~ 19299869 (-)
AMCG00001913 NA coding upstream 195394 19311038 ~ 19323661 (-)
AMCG00001916 LOC104952680,LOC108443646 coding upstream 343636 19459280 ~ 19460843 (-)
G161206 NA non-coding downstream 29787 19084112 ~ 19084976 (-)
G161165 cript,LOC107582781,LOC107728714 non-coding downstream 213045 18899147 ~ 18901718 (-)
G161161 NA non-coding downstream 227195 18886294 ~ 18887568 (-)
G161030 NA non-coding downstream 768741 18262244 ~ 18346022 (-)
G161039 NA non-coding downstream 810665 18301084 ~ 18304098 (-)
G161302 NA non-coding upstream 339480 19455124 ~ 19457742 (-)
G161346 LOC107739892 non-coding upstream 976469 20092113 ~ 20093345 (-)
G161391 NA non-coding upstream 1110013 20225657 ~ 20225919 (-)
G161475 NA non-coding upstream 1322824 20438468 ~ 20438673 (-)
G161471 if3ei,eif3l,LOC106576896 non-coding upstream 1360284 20475928 ~ 20478231 (-)
G161153 NA other downstream 263879 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 1203910 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 1249384 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 1304666 17808018 ~ 17810097 (-)
G160817 NA other downstream 1582773 17530866 ~ 17531990 (-)
AMCG00001945 NA other upstream 1224781 20340425 ~ 20347505 (-)

Expression


Co-expression Network