AMCG00001914


Basic Information

Item Value
gene id AMCG00001914
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19287278 ~ 19299869 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001914
agggagagacagagagagagagagagagagagagagagagagagagacggagagagggaggatgagCACAACTTTCTTTTATAAAGTAATCACAAGCCCTGGGTCAGGAGCTGGAGCACACTGGGTTCTGCAGTGACACTCATCTCAGTGCCCGGGGGGGGCTGCCAAAcggtttattttaatgtctatcCGGAAATTGTGTAACTTTGTGTTGCTGCTGTCGTTTCTTTTCGTTTGTGGCTGCAGCTGAATCACCACTCGTTATCGCATAAGGCGCAGAAGAGGGTGTATCTGCACTGTTTGGCAGCGAGCAGACAGACAGCTCTGCTGCACCCGAAACACGCTGCCCAGCTGGAGATGCTACAGTGACGGAGCAGAAACCCACTGGCCGCGCAGCTGCTCTCTCTCCGGGGGGCTCCCGCAGCTGCTCTTGCGCTCTCATCCCGCAGGAGATGCTCCGGCCAGGACCGGCCGCCGGCGTGGCTGTGCTCGCCCTGTGCGCCGCCCTGTGCGCCGCCCTGCAGGTGTGCGTCTCCGCGCTGCCCTTCACCTGCCCGGGCATCTGCCGCTGCGGCCGGGACTCGCTGAGCTGCACCCGGGCCACCCAGCTCGCCTCCACCGGGGACTTCTCCCACACCGCCAGCCTAAGACTAACCCATCTTCCGCTGCAAGAGATCCCCGGCAGGGCCTTCAGTGAGCTGATCAACATCTCCCGGATtgaaATCACACAGAGTGACTCGATCAAAACGATCCAAGGACAGGCGTTCATTTCCCTGCCCAGCCTTTCTGAGATCATGATACAGAACACAAAAAACCTGGTGGCTGTGGAGAAGGGGGCGTTCACCAACCTCACCAAGTTACGATACCTGAGCATCTGTAACACGGGGATCCGCGTGTTCCCCGACCTGACCACGATCGCCTCGCTGGAGTCCTACTTCTTCCTTGCAGTCGACCCCCACGGGGGCCCCTCTGTCCAGCTCacaagcctctctctctccagggagCTAGGGGACAACATGCACATCTCCACGGTGCCGGCCAACGCCTTCCTGGGGATGACGCAGGAGTATTCTCTCATgAACCTCTTTAAAAACGGATTTGAAGACATCCAGAGCCACGCGTTCAATGGGACTAAGGTGGATAAACTagTTCTGAAAGATAACAGATACCTGCGCAGGATCCACAGCGATGCCTTCAGTGGAGCCGAGGGACCCAGCATGCTGGACGTCTCCTCCACGGCGCTGCACTCGCTCCCGGCCCGGGGGCTGCAGGGGGTGCGGGTGCTGACGGCGCGCTCCGCCCACGCCCTGAAGACGCTCCCTCCCCTCGACAGCTTCCTGTCCCTGCAGGAGGCGCAGCTCACCTACCCCAGCCACTGCTGCGCCTTCACCAACTGGCACGCACACCGGGAAGACAGCTCCTTCCTGGGGGCGTTTGTGAACCTCACCAGGCCGTGCCCGAGCGACAAGAGGCAGGAGGACGCGTACCCTTCTGACAGCGGCCTGATGTATCCCGAGGACAGCAGCGATGTATACGACATCGATTTCCACTACCCTGACCTGGACCTGTGCGTCACCAACGTGCTCATCCGCTGCACCCCGGAGCCGGACGCCTTCAACCCCTGCGAGGATATCCTGGGCTTCGGCTTCCTGAGAGCCGCCATCTGGATCATCGCCCTGTTCGCCGTGGCCGGGAACGCATTggtgctgctggtgctgctgacCAGCCGCTACAAGCTCACGGTGCAGCGCTTCCTCATGTGCCACCTGGCCTTCGCCGACCTGTGCATGGGCGTCTACCTGCTGCTGATCGCCTGCATCGACTACCGCTCTCAGCACCAGTACTACAACCACGCCATCGACTGGCAGACGGGCGCCGGCTGTGGCGCGGCGGGCTTCCTCACCGTGTTCGCCAGCGAGCTGTCGGTCTACACACTCACCGCCGTCACGCTGGAGCGCTGGCACACCATCACCTACGCCATGCAGCTGGACCGCAAGCTGCGCCTGCGCCACGCCGCCGCCGTCATGGTGGGGGGCTGGGCCTCGGcgctgctgctggctgtgctgccCCTCTGCGGCGTGAGCAGCTACGCCAAGGTGAGCATGTGCCTGCCCATGGACATCGACTCGGCGCCGGCGCAGGGCTACGTCATCGCCCTGCTGCTCCTCAACGTGGTGGCCTTCACGGTCGTCTGCACCTGCTACGTGCGCATCTACCTGACCGTGCGCAACCCCGCGCTCTGCACCAAGCACAGCGACGCCACCATCGCCAAGCGCATGGCCGTGCTCATCTTCACCGACTTCCTGTGCATGGCGCCCATCTCCTTCTTCGCCATCTCGGCTGCGCTGAAGCTGCCCCTCATCACCGTCAGCCACTCCAAGATCCTGCTGGTGCTCTTCTACCCCATCAACTCCTGCGCCAACCCCTTCCTGTACGCCTTGTTCACCCGGGCCTTCCGCCGGGACGTGCTGAGCCGGTTAGGCTGCTGCCGGGCGCGCGCCGACCTCTACCGCACGCGCTGCCTCTCGGTGCGGAAGGTGCCGAACGCCAGCTCCCAGACAAGTGCCAACAAGAGCTCCCAGCCCATCCTCAGCCTGACGCCCTTCGcccacccctgcccccccgAGAAGAACCCGGACGGGCACTACTGCAAACCGCCCTTACGGACCATCTGAGCCGGGGATCGTGCCGGAGAACCGACGGTCGCTGAGCCCCTCGGATATCAGGGAATTTAAACATATGGAGATTCTTTtcatatgcaaaacaaacacacagacattttgcttttt

Function

GO: NA

KEGG:

id description
K04248 LHCGR; lutropin-choriogonadotropic hormone receptor

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001914 True 2789 mRNA 0.62 11 19287278 19299869

Neighbor

gene id symbol gene type direction distance location
AMCG00001910 fbxo11,LOC107550041,LOC107749363,LOC108430631,LOC108413220,LOC107728720 coding downstream 101158 19177265 ~ 19186120 (-)
AMCG00001912 kcnk12,LOC106515821 coding downstream 156199 19127262 ~ 19131079 (-)
AMCG00001911 kcnk12,LOC107589351,LOC107679129 coding downstream 171634 19114763 ~ 19115644 (-)
AMCG00001901 NA coding downstream 209121 19064520 ~ 19078157 (-)
AMCG00001905 NA coding downstream 232306 19054745 ~ 19054972 (-)
AMCG00001913 NA coding upstream 11169 19311038 ~ 19323661 (-)
AMCG00001916 LOC104952680,LOC108443646 coding upstream 159411 19459280 ~ 19460843 (-)
AMCG00001917 NA coding upstream 208128 19507997 ~ 19511624 (-)
AMCG00001918 NA coding upstream 215712 19515581 ~ 19519632 (-)
AMCG00001919 NA coding upstream 272330 19572199 ~ 19573651 (-)
G161206 NA non-coding downstream 202302 19084112 ~ 19084976 (-)
G161165 cript,LOC107582781,LOC107728714 non-coding downstream 385560 18899147 ~ 18901718 (-)
G161161 NA non-coding downstream 399710 18886294 ~ 18887568 (-)
G161030 NA non-coding downstream 941256 18262244 ~ 18346022 (-)
G161302 NA non-coding upstream 155255 19455124 ~ 19457742 (-)
G161346 LOC107739892 non-coding upstream 792244 20092113 ~ 20093345 (-)
G161391 NA non-coding upstream 925788 20225657 ~ 20225919 (-)
G161475 NA non-coding upstream 1138599 20438468 ~ 20438673 (-)
G161471 if3ei,eif3l,LOC106576896 non-coding upstream 1176059 20475928 ~ 20478231 (-)
G161153 NA other downstream 436394 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 1376425 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 1421899 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 1477181 17808018 ~ 17810097 (-)
G160817 NA other downstream 1755288 17530866 ~ 17531990 (-)
AMCG00001945 NA other upstream 1040556 20340425 ~ 20347505 (-)

Expression


Co-expression Network