Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00001916 |
| gene name | LOC104952680,LOC108443646 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 19459280 ~ 19460843 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: neurexin-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00001916 | True | 363 | mRNA | 0.62 | 2 | 19459280 | 19460843 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001913 | NA | coding | downstream | 135619 | 19311038 ~ 19323661 (-) |
| AMCG00001914 | NA | coding | downstream | 159411 | 19287278 ~ 19299869 (-) |
| AMCG00001910 | fbxo11,LOC107550041,LOC107749363,LOC108430631,LOC108413220,LOC107728720 | coding | downstream | 273160 | 19177265 ~ 19186120 (-) |
| AMCG00001912 | kcnk12,LOC106515821 | coding | downstream | 328201 | 19127262 ~ 19131079 (-) |
| AMCG00001911 | kcnk12,LOC107589351,LOC107679129 | coding | downstream | 343636 | 19114763 ~ 19115644 (-) |
| AMCG00001917 | NA | coding | upstream | 47154 | 19507997 ~ 19511624 (-) |
| AMCG00001918 | NA | coding | upstream | 54738 | 19515581 ~ 19519632 (-) |
| AMCG00001919 | NA | coding | upstream | 111356 | 19572199 ~ 19573651 (-) |
| AMCG00001927 | NA | coding | upstream | 160543 | 19621386 ~ 19634914 (-) |
| AMCG00001928 | nrxn1 | coding | upstream | 186909 | 19647752 ~ 19667440 (-) |
| G161302 | NA | non-coding | downstream | 1538 | 19455124 ~ 19457742 (-) |
| G161206 | NA | non-coding | downstream | 374304 | 19084112 ~ 19084976 (-) |
| G161165 | cript,LOC107582781,LOC107728714 | non-coding | downstream | 557562 | 18899147 ~ 18901718 (-) |
| G161161 | NA | non-coding | downstream | 571712 | 18886294 ~ 18887568 (-) |
| G161030 | NA | non-coding | downstream | 1113258 | 18262244 ~ 18346022 (-) |
| G161346 | LOC107739892 | non-coding | upstream | 631270 | 20092113 ~ 20093345 (-) |
| G161391 | NA | non-coding | upstream | 764814 | 20225657 ~ 20225919 (-) |
| G161475 | NA | non-coding | upstream | 977625 | 20438468 ~ 20438673 (-) |
| G161471 | if3ei,eif3l,LOC106576896 | non-coding | upstream | 1015085 | 20475928 ~ 20478231 (-) |
| G161480 | NA | non-coding | upstream | 1017465 | 20478308 ~ 20478719 (-) |
| G161153 | NA | other | downstream | 608396 | 18835782 ~ 18850884 (-) |
| G160925 | mta3,LOC105904126,LOC106516625,LOC107749351 | other | downstream | 1548427 | 17908754 ~ 17910853 (-) |
| AMCG00001863 | LOC105006094,LOC104951035,LOC101160874,LOC106578938 | other | downstream | 1593901 | 17860139 ~ 17865379 (-) |
| AMCG00001865 | NA | other | downstream | 1649183 | 17808018 ~ 17810097 (-) |
| G160817 | NA | other | downstream | 1927290 | 17530866 ~ 17531990 (-) |
| AMCG00001945 | NA | other | upstream | 879582 | 20340425 ~ 20347505 (-) |
