AMCG00001934


Basic Information

Item Value
gene id AMCG00001934
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20224324 ~ 20226763 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001934
ATGCACACAAAATTACAGGCTTCGGTGCTCACTTGTATCTGCCAAACAGTAAACAGGATATACCAATTTGACATTTTGCGGACGGGACAAGTCCCCCGGATCTGTCCCCCCGCTGCAATCGTCCAGGAGGTAGATGCCTGTGAAAGTACTGATGTGAAACTTTCTAAGCTCTTTGGCTTCCCTGCTGTGACGGTACCACCCCCCCACGCCCCAGGATCTAAAGGTTATGAACTCAGACTGTCTGACGGGAGCAGCGctgactcacacacattcaaactccCTGAGCTGCTCCTCCTGCCCACCAGCTTGCGCGACACAGGCAACGCCTGCTGGGCCGTCTGGAGAGCATCATCTCTTCTCACTGGTGTCATCCCTACTCTGGAAAACATGGAACAAAAATTCCAACACACCGGGTTACCGAGAGCTACAGCTAAAGGAAATCACTTCACCACGTGGGAGATGGGGTTAAAGGTCACGGCCAGACTGCAGACCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001934 True 495 mRNA 0.53 5 20224324 20226763

Neighbor

gene id symbol gene type direction distance location
AMCG00001932 thbs2 coding upstream 375 20202509 ~ 20223949 (+)
AMCG00001935 NA coding upstream 56547 20134146 ~ 20167777 (+)
AMCG00001936 LOC107739892 coding upstream 127733 20089637 ~ 20096591 (+)
AMCG00001937 NA coding upstream 136857 20081713 ~ 20087467 (+)
AMCG00001926 NA coding upstream 254412 19950452 ~ 19969912 (+)
AMCG00001931 NA coding downstream 24215 20250978 ~ 20262962 (+)
AMCG00001940 NA coding downstream 65539 20292302 ~ 20297316 (+)
AMCG00001944 slc35f3 coding downstream 77864 20304627 ~ 20306309 (+)
AMCG00001942 NA coding downstream 87858 20314621 ~ 20330886 (+)
AMCG00001941 slc35f3 coding downstream 105612 20332375 ~ 20340657 (+)
G161285 NA non-coding upstream 715802 19508243 ~ 19508522 (+)
G161282 NA non-coding upstream 766572 19455088 ~ 19457752 (+)
G161170 NA non-coding upstream 1300652 18923449 ~ 18923672 (+)
G160985 NA non-coding upstream 2005293 18218764 ~ 18219031 (+)
G160943 NA non-coding upstream 2184950 18038704 ~ 18039374 (+)
G161392 NA non-coding downstream 9414 20236177 ~ 20236391 (+)
G161469 NA non-coding downstream 247908 20474671 ~ 20474889 (+)
AMCG00001889 cript,LOC107582781,LOC107728714 other upstream 1322606 18899337 ~ 18901718 (+)
AMCG00001880 NA other upstream 1550509 18663995 ~ 18673815 (+)
AMCG00001883 NA other upstream 2007186 18210009 ~ 18217138 (+)
AMCG00001881 NA other upstream 2014933 18187902 ~ 18209391 (+)
AMCG00001846 NA other upstream 2761390 17417351 ~ 17462934 (+)

Expression


Co-expression Network