AMCG00001942


Basic Information

Item Value
gene id AMCG00001942
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20314621 ~ 20330886 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001942
ATGCTGTGGGCTCACTCCCCTGAGCGCAGAGAGCTCAATCTCATTCACTCTCCTGCACAGCGGCCCTCAGTCGTGTCCTGGCCACTGGCAGTAGCCTTCATCAAAGCTGACTTTGAGAAGCTGCTGAAAGTCATTCCTGGCCTGGAGGCTGCAGAGCTGCTTCGTGCGTCTGTCCTGAGAACCCACTCCGAAGCTTTCAGCGGTCTCATCGTGGTTTGGCTCCTCTACCACGATGACATCCGAGAGCAGTTTATTATCCCGAGTGCAGCACAGAGACGCGGCTCGGTGCTCAGTGGCACTGGGAGCGTCCACACACGCGTGTTCAGGCAGAGCCGCAGTGCTGTGGGGGGTCGGGGGGTCCCCGCTGTCCCCGCTGTCCGACAGCGCATCGCTCTCCCGGTGTCCCCCGAGTCCCCCCGGGGATGTAGGGGGTCGCTCAGCCGGCTGCCCTGGCAGggCATTGCGAGGCTGCTGCAGAGAGGGGCAACCGAGGGAGAGACGAGTGGAAAGGGGGAGAAGAAGCACAGCATCTGCTGCGACACCGGCTTCAGGGATGTAGTCGACCGGGCAGAGCTCCGCTTCACCGAGCTCGCCATGAAGAAACACTCCGCCCGGGTGGCGCCGCTGTCTGCCTGCAACAGCCCGGTGCTCACCTTGACCAAAGTGGAGGGACtgttcccccccaccctgctaGCGAGGAGGATGACCACATGGGCGGGTCACTCTGCTCTCTCCTCTGCCAGGGCCGAGAAACCCGAGGGCCGAGTGGTCGGCCACCCTGGAACTGGTACCCTTCACCAGCTCGCCCCAAAACACCTGAATATCCGAGAGAAGCAGAAATCCTCTCGGCGTGGGATGCTTACCTACGAGATGAGAGTGttgatgaaatTGCACCTCATGAACCTCTGGATGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001942 True 915 mRNA 0.62 8 20314621 20330886

Neighbor

gene id symbol gene type direction distance location
AMCG00001944 slc35f3 coding upstream 8312 20304627 ~ 20306309 (+)
AMCG00001940 NA coding upstream 17305 20292302 ~ 20297316 (+)
AMCG00001931 NA coding upstream 51659 20250978 ~ 20262962 (+)
AMCG00001934 NA coding upstream 87858 20224324 ~ 20226763 (+)
AMCG00001932 thbs2 coding upstream 90672 20202509 ~ 20223949 (+)
AMCG00001941 slc35f3 coding downstream 1489 20332375 ~ 20340657 (+)
AMCG00001946 eif3l,if3ei,LOC106576896,LOC102789421 coding downstream 144279 20475165 ~ 20481455 (+)
G161392 NA non-coding upstream 78230 20236177 ~ 20236391 (+)
G161285 NA non-coding upstream 806099 19508243 ~ 19508522 (+)
G161282 NA non-coding upstream 856869 19455088 ~ 19457752 (+)
G161170 NA non-coding upstream 1390949 18923449 ~ 18923672 (+)
G160985 NA non-coding upstream 2095590 18218764 ~ 18219031 (+)
G161469 NA non-coding downstream 143785 20474671 ~ 20474889 (+)
AMCG00001889 cript,LOC107582781,LOC107728714 other upstream 1412903 18899337 ~ 18901718 (+)
AMCG00001880 NA other upstream 1640806 18663995 ~ 18673815 (+)
AMCG00001883 NA other upstream 2097483 18210009 ~ 18217138 (+)
AMCG00001881 NA other upstream 2105230 18187902 ~ 18209391 (+)
AMCG00001846 NA other upstream 2851687 17417351 ~ 17462934 (+)

Expression


Co-expression Network