AMCG00001947


Basic Information

Item Value
gene id AMCG00001947
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20406331 ~ 20411457 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001947
GGCAGATCACAGCTGGAGAGCACAGCTGTCTGCCGGAGAGGAGGGATGAGGTACCCTGGGCTCCGCCGCTGACGAGCTCATAAAAGGCACATTTACACGCCGCTGGGTTTCCTGTCCAGTGGGCTGCAGCGTCTCTATCGGACATGCTGGCCAGAAGAGCAGGTCCAGGAGCCGCCTGTGTGCGCTCCGCGGCGGGGATTGATCGCGGCAGGGTCGGGGAGAGGTTACAGGCTGCCCTGGCCGGACTGCAGGAGCTGCACCTCCTGCGGGAGCGGCAGGGCGACAGGGTCCGCTGGGCTCTGCAGATGCAGCGGGACAGGAGCAGCCCGCCAGCCCGTCCTGGGACGGACAGCCCGGCTTACAGCCCTGACGAGCAGCGCCTGGAGGCCACGCTGACCGCCCTGAAGCAGCAGCTGTCTCGTCTGCGGAGGCAGGATGTGGGACTGAAGAGCCACCTGCAGCAGCTGGATGAGCAGATCAGCGTACTGAAGCTGGACGTGAGCAAAGCCTCCACAGAGCACCTGGAGAGTGACAGCAGGCCCAGCTCAGGTTTCTATGACCTGAGTGATGGCGGCTCGGGCTCTCTGTCGAACTCGTGTACCTCGGTGTGCAGCGAGAGCCTGTGCTCATCCCTCCGGTGCCCACGGCAGCTCTGCCTGCCCGAGCCGCGGCCTCGCTCTGCGGACGAGAGCAGCGTACCGGAGAGGGTGGTCCACCAGGGGGGGACTCGGGGGACCCGCATCCTGACCAGCGCCGAGGCGATAGACAGCAGGGCCCGGCAGAGACCCGTCTCCACAGGTGATTTGGACCGAATGACGCTTCCAGGCCTGGGATTCTATAAAGCTCCAGCGGTGAAGATTGTGTCCCTATGCCCAGGCATTAGCAATCAGCATGTAGCTGTTGACCCCAAGTACCAGAGTGACTTGGTGTCCAGGAGTGGTACTGATGTGTATGAGTATCCCAGCCCCCTGCATGCTGTGGCCCTCCAGAGCCCTATCTTCTCCCTCAGCGGAGAGAGCCCCCCAACACGGACTAGCCCGACGGCCCCTGAGGCCAGGCCAGACGCAAGCAGGGCCCTGCAGGGAAAGGTCTTCAGTGAAAGCAGGCCCAATGGCTATATCAGCAAGCTCCTTCAGCACAGCAGGAGCAAGACGAGTCTTCAGCCTGAGGGCTGCTGTAGGGCCGACAGAGCTCAGTCGCAGGTGAAGAGCTGTGAGGATGcagcctctctcagccctgCGGTGACAAGTGCCAGTGCTGGAGGACTTCCCAGGGTTAATGGAGAGCGCCGTCTCTCTAAAGACCAGAGCTACACAAAGCCACATGATGTTAAACTTGTTTCTGAGGAGCAAGCCACATGTGTGACCAGCAGACAAGAGCTTGTGACTCAAGTTACCAAGACTGCACAGAGTCACGCACAGGAGCTTAAACAGAAGGTCCGTAATTGTCCTGAGAGAGCTCGGCAGGGCCCGGTGATTTCCTGCTTTGACCAAGACTTAAGGGACCTGCAGCCTGAGGCAGCACAGCCTAGAAAACCTGCCGCACAACATAGAGCAGCGTCACACGGGAACCTGGTCAGAAAGAGCTCTGAGGCCCGGCTGCACCCTGACTTCGTTCAAGCCAAATTTGTTCCGGCCGGTTCTCAGGAAGTGACGGTCAGACAGGCTGGCAAGAAGACAAAGGCAGTAAAACTGAAGCGGAGAGGCAGCGAGAAACTGAGGACTGGAAAACCGCTGTCCTGGGAAGAGCTGAAGGAACCCCCCCAGGGCAGCCAGGCCCCCGTGGCTGAGAGCTTCCCCTGCCACAGGCCGGCTGAACGCAGAGCTGCTCTCAGGCCACTGGGCTGCTGCGGAGACCAGGCCGCCAGGTGGTGTTCAGAGGCTCGTTTGTGTGCTGCACCCAGGCCAGGACCTCTCGTGGCCCCCAGGCAGCAGGAGCTCAGTGGGGTGGATCCGGTCAGGAGGAAGCAGGCGCGTAAGTGGCAGTCGGAAGTGGAGATTTCGTCTCCTCCTCCGCCCGGCCGAACTGAGGCTCCACCACCGGGGCTGTGCAGACCTGGCATGGTGCGCAGCGTCAGCATGAGGCCCCGCCCAGGACCCTGCGCCCCCCGGCTGCGCCGCCCCGGCTCCCACTGCGGCCTGCTGAGCGAGTCAGAGCTGTCGGAGTACGCGGCCCGGTGTCCGTCCCTGTTCCACTCCAGCGTGGCCGAGAGCAGTGAGAGCGAGCGCAGCGACTTCACTGCCAACCGCTTCGGCGACAGCGAGTCCAGCGGTTCCAGCTCCTCGGACAGCAGCCTGTCTCTGGACTCCGGGCAGGACGGAGAGGGAGGCGAACTCGTCTGGGCCGAGGCCATGCTGGGCCCCACGGCGGCCAggctgcccccacccccccagcccgAGCCGCCCACATGCCGCATCAAGGCGTCCCGCGCGCTGAAGAAGAAGATCCGGCGATTCCAGCCGGCCGCACTCAAGGTGATGACGATGGTGTAGCCAGCTGCCCACGGGCCCGGACTTCCTGCTGGGCTTCGTCTTTCTTACAAGACAGGACAATACCAGTGGCCATTAGAAGAAAACAATACTTGTCCTGAACTGTAGATGACCCCACGCACCCAAGACTAATTTCTTTTGAtaattcttgtttttataaCGTCTACTTTGCTTACAATTGATGTTCTGATGTGTAAACcaatatttttataatgcagtATTTTTATGTTGCTTTATTTCAG

Function

GO:

id name namespace
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0044464 obsolete cell part cellular_component

KEGG:

id description
K22154 DACT; dapper

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001947 True 2731 mRNA 0.61 4 20406331 20411457

Neighbor

gene id symbol gene type direction distance location
AMCG00001948 NA coding downstream 14005 20363308 ~ 20392326 (-)
AMCG00001943 tarbp1 coding downstream 43880 20347992 ~ 20362451 (-)
AMCG00001933 NA coding downstream 122829 20263404 ~ 20283502 (-)
AMCG00001938 LOC106611227,LOC106589746 coding downstream 275337 20101294 ~ 20130994 (-)
AMCG00001939 NA coding downstream 307184 20097552 ~ 20099147 (-)
AMCG00001949 smoc2 coding upstream 31920 20443377 ~ 20468386 (-)
G161391 NA non-coding downstream 180412 20225657 ~ 20225919 (-)
G161346 LOC107739892 non-coding downstream 312986 20092113 ~ 20093345 (-)
G161302 NA non-coding downstream 948589 19455124 ~ 19457742 (-)
G161206 NA non-coding downstream 1321355 19084112 ~ 19084976 (-)
G161165 cript,LOC107582781,LOC107728714 non-coding downstream 1504613 18899147 ~ 18901718 (-)
G161475 NA non-coding upstream 27011 20438468 ~ 20438673 (-)
G161471 if3ei,eif3l,LOC106576896 non-coding upstream 64471 20475928 ~ 20478231 (-)
G161480 NA non-coding upstream 66851 20478308 ~ 20478719 (-)
AMCG00001945 NA other downstream 58826 20340425 ~ 20347505 (-)
G161153 NA other downstream 1555447 18835782 ~ 18850884 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other downstream 2495478 17908754 ~ 17910853 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other downstream 2540952 17860139 ~ 17865379 (-)
AMCG00001865 NA other downstream 2596234 17808018 ~ 17810097 (-)

Expression


Co-expression Network