G157196


Basic Information

Item Value
gene id G157196
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 587975 ~ 589300 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU197970
AAAACCAAGCatttccaaattctcttacataGTGGTGGCCAGTATGGGGATGATGACGGATATTTGCTACAAGTCACAGATTGCTCTGCAGTATTAATGTGCATGCATTGACAGAATAGCCTGTATATCCGACTTTGCCTGAAAGACGAACCTCGCGTAACGGTGTCGTCAGCAAAGCCAGGATTGTACGAACTGATCATTGACTTTTGGAGTGTGTAGTGATTTCAACTCCAAGGAGGAAAACCACATAAAGTGTGGGCGAGTGATTGAAAAGTTACCTTCTGTAAACATGGATCATCTGTGTCAGAAGGCAAGCCGGTGTGTCCTTAAGGACCGAATTAAAAACGCCATAGCAAAGTGTGCGAGCACTTCATTACAGAACTTAGAGTCTTAGAgttaacaaatgaaaaagtgatTAAGTCACAACTGAAATTAGCTGCTCTGTATGGGTTAGCTCAGTGTGTTAAGATCTTATCTGATCATTCTGCCGAGGTAGAAACTAAATTGAAACGTGTTAGCGATGAGAAATCTGCCctgcttttacaaaatgcagagTTGAAACTTCAGATGCAGACAGTGAGCAATAATGCTGTGTTTCGATAaagagcagcgcagatctgacAATGAGAGTCTGAGAAAAGAGAGCCGCACTTTACAGCAACAGTTCAATGATTGCCAGGCAGCTCTCAGACACACTGCGACCAAAGTTTCCCAAAGTAATCAGTAAACAGCTAGTAATGCGCTTAAAAACTAAACTAGGCATGAAAACTGCTATCATTGCAGCTGTCGGAGGTCCGTGTTGTCCTGAACTGGactctgatgatgatgaatattggGAAGAGCTAGAGAGAGAGGCGTGGGACTGTGAATTCAATCCTGAATCCGCTCCCGTCTGTGTGCTTCGCACTCGGGCTGCAGTGAAATGCAGGATGTTAAGGACGAGTGACACAGAGCCGAGTTCAATACATGAAAGTACGAGAAGACGAAGTCAttcagaaaacacagacagctCTGAAGATCCTCAAGTCAGTAATGAGCCTCAGACAACTAAGCGTCTGACTGCTCTGGAACTGAGAGCATTCAAAGATGATTTGGGTCCAATTACTCTAGAGACAGATTTAGAGGAATTAATAATTCGACTTTTATCTTGCATTCAGTTACACCCACAACTGAACGACCTGCATTGGAAAACAATAGTTTTAGCTGCATGTTCTCCAACTTTAAGATCCCTGTTAAGTGTTGATGAAGTGGGGAGAGTGACTGCGTGGACTGAAGTCTTAGAGTTAATAAGCGAAGCTTGTGGCTGGAATGCAGCAGATTGGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197970 True 1326 TUCP 0.43 1 587975 589300

Neighbor

gene id symbol gene type direction distance location
AMCG00001372 NA coding upstream 44441 533864 ~ 543534 (+)
AMCG00001373 NA coding upstream 58186 528110 ~ 529789 (+)
AMCG00001371 NA coding upstream 175134 136889 ~ 412841 (+)
AMCG00001374 NA coding downstream 5473 594773 ~ 606467 (+)
AMCG00001378 NA coding downstream 104468 693768 ~ 699275 (+)
AMCG00001377 klhdc3,LOC108415716 coding downstream 142864 732164 ~ 746098 (+)
AMCG00001376 NA coding downstream 197752 787052 ~ 793305 (+)
AMCG00001375 NA coding downstream 209668 798968 ~ 805479 (+)
G157195 NA non-coding upstream 9855 577921 ~ 578120 (+)
G157126 NA non-coding upstream 485704 101082 ~ 102271 (+)
G157231 NA non-coding downstream 206018 795318 ~ 795557 (+)
G157244 NA non-coding downstream 349939 939239 ~ 939481 (+)
G157247 NA non-coding downstream 365295 954595 ~ 954974 (+)
G157256 NA non-coding downstream 512609 1101909 ~ 1104516 (+)
G157327 NA non-coding downstream 1119645 1708945 ~ 1711815 (+)
AMCG00001392 NA other downstream 1102376 1691676 ~ 1694986 (+)
G157369 NA other downstream 1382581 1971881 ~ 2000928 (+)
AMCG00001436 gng4 other downstream 3159254 3748554 ~ 3765362 (+)
G157781 NA other downstream 3285909 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 3433497 4022797 ~ 4023910 (+)

Expression


Co-expression Network