G157369


Basic Information

Item Value
gene id G157369
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 1971881 ~ 2000928 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198192
cactgttaaaatacacctaccattaaaattatagactgatcatttctttgtcagtgggcaaacgtacaaaatcagcaggggatcaaatacttttccccccactgtaaagataaaaaaaataataacagggtTCTTGACCTTTTCTCATAGAAAAATTCAAGATTTTTCCAAACTGCTTTGTAAGATTTCAAGGCAAATCTGTAGCCACTTTCTGTGTTAAAGAAGTGCATGTTTATAGAGTATTTTGACAAATACTGTGCAATTcaataaatcacaaaaataatgtgcaatgaataaattaacatatttaaataaacattaagtaTTGTGTATACCTTCCCCGATCCACTTCCCCGATAGATTCAGATTCTCCAGTAACTTAAAATAATAGGCTTATTGAAATTACATACCTGGACATCTACCATTATTTGGTTGTGTTAAAGTACAAAACATTTGTGTTAAAGTATCTGTACATACTCAGgggtgtgggggaaaaatatagaaatcctatcctgcctctgtccttggtgtgctgttacatGTTGAAGAAATCTCTGAGAACTTGGAACAACAGTTGAAAGGTAGGGTAAACAATTTTTCTATGGCCCTTGACGAGAGCTGTGATGTTAAAGACCAGCTGTTGATTTTCATACGAGGCAATGCTACAGATTTTACATTGACTGAAGAACTTGCGTCAGTGCAGTCAATGAGAAACTGTCCGGAAAATATATGATGGCTCAGTTTGGGGAAGGTGCTGAAAAGAGTGTGGGACCTGAAATCAGAGATCGATTTATTTTTGCGAACGAAAGTAAAAGATGCAGACTTCCCTCAACTGCATGACGCGGACTGGCAGACTGATTTTGCACTTGCCCTTGATATCATGGGTCTCCTGAATGATCTGAATTGTAAACTACAAGGAAGGAGGCTTTTTGCTTATGACATGTACTCCCTTGTCAAAGCCTTTATGGCAAAGTTGCTACTTTTGTCCTGTCAAATTGAAGGCAATAACTTCACACACCTCCCAACATTGCAACAGATTACAATATCTCATGTGAACTGGGAAAAATATGCATCTCTACTGCTCGCTTTGCACGCTGAATGTTCACGCCggttaattgattttaaaatgttagaaaatgaCATGGCTTTGATTTCGTCCACTATCACATTCAGTGTGGACAACGCTCCTATTGATCTCCAGCTTGAGCTTATTGACGTGCAGTCTGATGCACTACTTGCAGAACAATTCAAATCTGCACCACTCCTGAAGTTTTATGCATCTCTCAATGAACAGAACTTTCAAAAGATCAGGGCCCATGCTCANNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198192 True 1326 TUCP 0.38 2 1971881 2000928

Neighbor

gene id symbol gene type direction distance location
AMCG00001394 NA coding upstream 78183 1722432 ~ 1893698 (+)
AMCG00001393 NA coding upstream 304178 1655576 ~ 1667703 (+)
AMCG00001388 NA coding upstream 333969 1632813 ~ 1637912 (+)
AMCG00001391 klc4,LOC108263390,LOC102210354 coding upstream 371894 1576221 ~ 1599987 (+)
AMCG00001389 NA coding upstream 435642 1507240 ~ 1536239 (+)
AMCG00001395 NA coding downstream 19395 2020323 ~ 2022140 (+)
AMCG00001399 NA coding downstream 55959 2056887 ~ 2058997 (+)
AMCG00001400 NA coding downstream 75825 2076753 ~ 2104545 (+)
AMCG00001407 NA coding downstream 211323 2212251 ~ 2218503 (+)
AMCG00001403 tmem178,LOC107691291,LOC105026821,LOC107751123,LOC107570655,LOC106564792 coding downstream 379316 2380244 ~ 2393334 (+)
G157361 NA non-coding upstream 74601 1897074 ~ 1897280 (+)
G157336 NA non-coding upstream 180354 1789391 ~ 1791527 (+)
G157327 NA non-coding upstream 260066 1708945 ~ 1711815 (+)
G157256 NA non-coding upstream 867365 1101909 ~ 1104516 (+)
G157247 NA non-coding upstream 1016907 954595 ~ 954974 (+)
G157372 NA non-coding downstream 3205 2004133 ~ 2083118 (+)
G157373 NA non-coding downstream 6392 2007320 ~ 2011467 (+)
G157461 LOC100846954 non-coding downstream 414588 2415516 ~ 2415966 (+)
G157473 NA non-coding downstream 504648 2505576 ~ 2505911 (+)
G157475 NA non-coding downstream 510308 2511236 ~ 2511757 (+)
AMCG00001392 NA other upstream 276895 1691676 ~ 1694986 (+)
G157196 NA other upstream 1382581 587975 ~ 589300 (+)
AMCG00001436 gng4 other downstream 1747626 3748554 ~ 3765362 (+)
G157781 NA other downstream 1874281 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 2021869 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 2044428 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 2622539 4623467 ~ 4652000 (+)

Expression


Co-expression Network