G157477


Basic Information

Item Value
gene id G157477
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 2517622 ~ 2517991 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198329
tgcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggttcgagttgccaaatgtcagcctcgaaaccttaatgacttggagaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtgtccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccatcaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaatttataacttttttgaaatgcatttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198329 True 370 lncRNA 0.42 1 2517622 2517991

Neighbor

gene id symbol gene type direction distance location
AMCG00001403 tmem178,LOC107691291,LOC105026821,LOC107751123,LOC107570655,LOC106564792 coding upstream 124288 2380244 ~ 2393334 (+)
AMCG00001407 NA coding upstream 299119 2212251 ~ 2218503 (+)
AMCG00001400 NA coding upstream 413077 2076753 ~ 2104545 (+)
AMCG00001399 NA coding upstream 458625 2056887 ~ 2058997 (+)
AMCG00001395 NA coding upstream 495482 2020323 ~ 2022140 (+)
AMCG00001406 NA coding downstream 100245 2618236 ~ 2657002 (+)
AMCG00001410 NA coding downstream 403981 2921972 ~ 2922279 (+)
AMCG00001415 NA coding downstream 901413 3419404 ~ 3420432 (+)
AMCG00001422 NA coding downstream 1005347 3523338 ~ 3530730 (+)
AMCG00001420 egln1,LOC107737236,LOC107556149,LOC105893867,LOC107572057 coding downstream 1028881 3546872 ~ 3554580 (+)
G157475 NA non-coding upstream 5865 2511236 ~ 2511757 (+)
G157473 NA non-coding upstream 11711 2505576 ~ 2505911 (+)
G157461 LOC100846954 non-coding upstream 101656 2415516 ~ 2415966 (+)
G157372 NA non-coding upstream 434504 2004133 ~ 2083118 (+)
G157373 NA non-coding upstream 506155 2007320 ~ 2011467 (+)
G157481 NA non-coding downstream 26872 2544863 ~ 2545145 (+)
G157486 slc8a1 non-coding downstream 77842 2595833 ~ 2601447 (+)
G157526 NA non-coding downstream 290386 2808377 ~ 2816923 (+)
G157530 NA non-coding downstream 311082 2829073 ~ 2854378 (+)
G157545 NA non-coding downstream 535177 3053168 ~ 3053443 (+)
G157369 NA other upstream 516694 1971881 ~ 2000928 (+)
AMCG00001392 NA other upstream 822636 1691676 ~ 1694986 (+)
G157196 NA other upstream 1928322 587975 ~ 589300 (+)
AMCG00001436 gng4 other downstream 1230563 3748554 ~ 3765362 (+)
G157781 NA other downstream 1357218 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 1504806 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 1527365 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 2105476 4623467 ~ 4652000 (+)

Expression


Co-expression Network