G157640


Basic Information

Item Value
gene id G157640
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 3436345 ~ 3437663 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198517
tttttttcttttttttgtggtgtgtatatttttaggTTTGTGTGTACCACTGAGGAGAAGCACTAAATTTCGTTGTACAGTTgtgcaataacaataaaagGGTGTGGACACTTATATGAGATGACAGACCAATTGCCAGCAAaccaatgttttaaaatcatcaaTGTCAAAATGAACTGATTCCTCAGAAGTACAGTGTGAAACATTTCCAAATGAacttgaacaaaaataaaattgtttgtGGCAGTTCACCTGatctttaaaacaaagcactgaGACTTTTTTGtgagaattttttttaaaatattctaacACTCGgatactaataaaaataaatgtgaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198517 True 343 lncRNA 0.31 2 3436345 3437663

Neighbor

gene id symbol gene type direction distance location
AMCG00001415 NA coding upstream 15913 3419404 ~ 3420432 (+)
AMCG00001410 NA coding upstream 514066 2921972 ~ 2922279 (+)
AMCG00001406 NA coding upstream 779343 2618236 ~ 2657002 (+)
AMCG00001403 tmem178,LOC107691291,LOC105026821,LOC107751123,LOC107570655,LOC106564792 coding upstream 1043011 2380244 ~ 2393334 (+)
AMCG00001407 NA coding upstream 1217842 2212251 ~ 2218503 (+)
AMCG00001422 NA coding downstream 85675 3523338 ~ 3530730 (+)
AMCG00001420 egln1,LOC107737236,LOC107556149,LOC105893867,LOC107572057 coding downstream 109209 3546872 ~ 3554580 (+)
AMCG00001421 ero1b coding downstream 126857 3564520 ~ 3587440 (+)
AMCG00001439 NA coding downstream 170652 3608315 ~ 3648819 (+)
AMCG00001438 NA coding downstream 238820 3676483 ~ 3741399 (+)
G157635 NA non-coding upstream 29943 3405148 ~ 3406402 (+)
G157632 NA non-coding upstream 35090 3394245 ~ 3401255 (+)
G157602 NA non-coding upstream 116412 3316486 ~ 3319933 (+)
G157584 NA non-coding upstream 160730 3225589 ~ 3275615 (+)
G157583 NA non-coding upstream 215095 3217077 ~ 3221250 (+)
G157668 NA non-coding downstream 51400 3489063 ~ 3493169 (+)
G157783 NA non-coding downstream 444179 3881842 ~ 3917073 (+)
G157834 NA non-coding downstream 629425 4067088 ~ 4067627 (+)
G157966 NA non-coding downstream 1258891 4696554 ~ 4702861 (+)
G157975 NA non-coding downstream 1276232 4713895 ~ 4714160 (+)
G157369 NA other upstream 1435417 1971881 ~ 2000928 (+)
AMCG00001392 NA other upstream 1741359 1691676 ~ 1694986 (+)
G157196 NA other upstream 2847045 587975 ~ 589300 (+)
AMCG00001436 gng4 other downstream 310891 3748554 ~ 3765362 (+)
G157781 NA other downstream 437546 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 585134 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 607693 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 1185804 4623467 ~ 4652000 (+)

Expression


Co-expression Network