G157781


Basic Information

Item Value
gene id G157781
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 3875209 ~ 3880779 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198685
ACATGGACTTTACCCACATATAATTACCATAACACgatattaaaatcaatgaataggattttaaaataaaattcataaTTTATGTACCGATACTTATTTTGCGGAATTACGTCTTCTTGTTCGTATACGTTTACTTTACTGAAACATCCGGGAAATTAGGTGTTTGTAAATACACTAACTCGTCAAGTTTAGTGGTCATAAACTTATCGTTTGGTAGCATGTATTGATTGCTGACGACGCTTTAGCTTAGCTACAATTAAACTGACAGTATGACTCAAGTAACAAAGGAACAATTTGGTACAATACCACAGAAAGGAAGCGTAGaaaaatttatattaaaatccGACGATGTGGTGGTAGAAATCATATCTCTTGGATGtataattacagctttaaagacGAAAGACAAGCGAGGCCAATTTGATGACATCGTTCTTGGTTTTGATAATCTAGAGGGATACTGCTTTGGCAATTCGCGGTATTTTGGAGCCGTTGTGGGACGGGTAGCCAACAGGATCGCCAAAGGGAAGTTCAGTGTGGATGGAAAGGAGTATCAGCTTGGCATCAATAACGGGCCTAATGCTCTGCACGGAGGACTGGAAGGCTTTGACAAGGTAAATGAAGAGACCAGTGACACATGTCACTTATCAGTGCAGCTTAAatgcagatgt
>TU198688
ACATGGACTTTACCCACATATAATTACCATAACACgatattaaaatcaatgaataggattttaaaataaaattcataaTTTATGTACCGATACTTATTTTGCGGAATTACGTCTTCTTGTTCGTATACGTTTACTTTACTGAAACATCCGGGAAATTAGGTGTTTGTAAATACACTAACTCGTCAAGTTTAGTGGTCATAAACTTATCGTTTGGTAGCATGTATTGATTGCTGACGACGCTTTAGCTTAGCTACAATTAAACTGACAGTATGACTCAAGTAACAAAGGAACAATTTGGTACAATACCACAGAAAGGAAGCGTAGaaaaatttatattaaaatccGACGATGTGGTGGTAGAAATCATATCTCTTGGATGtataattacagctttaaagacGAAAGACAAGCGAGGCCAATTTGATGACATCGTTCTTGGTTTTGATAATCTAGAGGGATACTGCTTTGGCAATTCGCGGTATTTTGGAGCCGTTGTGGGACGGGTAGCCAACAGGATCGCCAAAGGGAAGTTCAGTGTGGATGGAAAGGAGTATCAGCTTGGCATCAATAACGGGCCTAATGCTCTGCACGGAGGACTGGAAGGCTTTGACAAGattgcagacatccgcaggctcttcaatacgccaccctcatctcccatcacactgaaacctcccaccgatcaagcttccttt

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU198685 False 671 TUCP 0.38 2 3875209 3876273
TU198688 True 695 TUCP 0.40 3 3875209 3880779

Neighbor

gene id symbol gene type direction distance location
AMCG00001437 eif4a3,LOC107702040 coding upstream 103474 3766101 ~ 3771735 (+)
AMCG00001438 NA coding upstream 133810 3676483 ~ 3741399 (+)
AMCG00001439 NA coding upstream 226390 3608315 ~ 3648819 (+)
AMCG00001421 ero1b coding upstream 287769 3564520 ~ 3587440 (+)
AMCG00001420 egln1,LOC107737236,LOC107556149,LOC105893867,LOC107572057 coding upstream 320629 3546872 ~ 3554580 (+)
AMCG00001441 NA coding downstream 7463 3888242 ~ 3894909 (+)
AMCG00001440 NA coding downstream 23698 3904477 ~ 3914556 (+)
AMCG00001429 NA coding downstream 105943 3986722 ~ 4013882 (+)
AMCG00001431 NA coding downstream 202259 4083038 ~ 4095370 (+)
AMCG00001432 ttbk1,LOC105907619 coding downstream 231291 4112070 ~ 4121193 (+)
G157668 NA non-coding upstream 382040 3489063 ~ 3493169 (+)
G157640 NA non-coding upstream 437546 3436345 ~ 3437663 (+)
G157635 NA non-coding upstream 468807 3405148 ~ 3406402 (+)
G157632 NA non-coding upstream 473954 3394245 ~ 3401255 (+)
G157602 NA non-coding upstream 555276 3316486 ~ 3319933 (+)
G157783 NA non-coding downstream 1063 3881842 ~ 3917073 (+)
G157834 NA non-coding downstream 186309 4067088 ~ 4067627 (+)
G157966 NA non-coding downstream 815775 4696554 ~ 4702861 (+)
G157975 NA non-coding downstream 833116 4713895 ~ 4714160 (+)
G157985 NA non-coding downstream 991916 4872695 ~ 4875144 (+)
AMCG00001436 gng4 other upstream 109847 3748554 ~ 3765362 (+)
G157369 NA other upstream 1874281 1971881 ~ 2000928 (+)
AMCG00001392 NA other upstream 2180223 1691676 ~ 1694986 (+)
G157196 NA other upstream 3285909 587975 ~ 589300 (+)
AMCG00001433 NA other downstream 142018 4022797 ~ 4023910 (+)
AMCG00001430 srf other downstream 164577 4045356 ~ 4062333 (+)
AMCG00001457 NA other downstream 742688 4623467 ~ 4652000 (+)
AMCG00001480 NA other downstream 1485226 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 1712901 5593680 ~ 5633349 (+)

Expression


Co-expression Network