G157834


Basic Information

Item Value
gene id G157834
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 4067088 ~ 4067627 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198757
AAAAATCATGGCTCCAGCAGGGAAAACACTCAATAACTTTTATTGCTAAGTTTTTCAAGCAGCAGCCCTTGCGTAATGTCGGAGCAGTTTGCGACTTCTGTCTCGGGTAAAACTAAAGACGCACGACTGAAAAGAGGATTTGAAGTCTAGCCCACCAAGAGGGATCCTGCAAGAcgttttgctcttttttttttgttttgtctcctgtCGTAGTGGACTCCCACCTACCACGGGATTTCCTGAAAACTGCCGTTTGTGCTGGATGTAACAGGAAAGTTGCACATCGAGATGTCACAAACTGAAAACGTTACCCATCCAGTCTCAATGACCACCTCCGTCCAAAGCAGTGCTCTTAACGGGGACAATGAGAAACAGAACTGCAAAACCGAGCTGGTAAGAGATGCCCTTTTTCCACTCatctgtttttgctttaaacTGCAACTCTACACTTCTGGGGCTTTCAGCTGCTCGACACACCGAGGAAGCATTGCAGTCTGAGCTCGGGGATGCCTTTTCTCGAGTGCACTTGGTGGGGTTGGG

Function

GO:

id name namespace
GO:0008565 obsolete protein transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198757 True 540 lncRNA 0.47 1 4067088 4067627

Neighbor

gene id symbol gene type direction distance location
AMCG00001429 NA coding upstream 53206 3986722 ~ 4013882 (+)
AMCG00001440 NA coding upstream 152532 3904477 ~ 3914556 (+)
AMCG00001441 NA coding upstream 172179 3888242 ~ 3894909 (+)
AMCG00001437 eif4a3,LOC107702040 coding upstream 295353 3766101 ~ 3771735 (+)
AMCG00001438 NA coding upstream 325689 3676483 ~ 3741399 (+)
AMCG00001431 NA coding downstream 15411 4083038 ~ 4095370 (+)
AMCG00001432 ttbk1,LOC105907619 coding downstream 44443 4112070 ~ 4121193 (+)
AMCG00001435 NA coding downstream 68549 4136176 ~ 4153348 (+)
AMCG00001434 NA coding downstream 95046 4162673 ~ 4166553 (+)
AMCG00001446 NA coding downstream 110674 4178301 ~ 4204224 (+)
G157783 NA non-coding upstream 150015 3881842 ~ 3917073 (+)
G157668 NA non-coding upstream 573919 3489063 ~ 3493169 (+)
G157640 NA non-coding upstream 629425 3436345 ~ 3437663 (+)
G157635 NA non-coding upstream 660686 3405148 ~ 3406402 (+)
G157632 NA non-coding upstream 665833 3394245 ~ 3401255 (+)
G157966 NA non-coding downstream 628927 4696554 ~ 4702861 (+)
G157975 NA non-coding downstream 646268 4713895 ~ 4714160 (+)
G157985 NA non-coding downstream 805068 4872695 ~ 4875144 (+)
G158014 NA non-coding downstream 820487 4888114 ~ 4888352 (+)
G158089 NA non-coding downstream 1245441 5313068 ~ 5315236 (+)
AMCG00001430 srf other upstream 4755 4045356 ~ 4062333 (+)
AMCG00001433 NA other upstream 43178 4022797 ~ 4023910 (+)
G157781 NA other upstream 186309 3875209 ~ 3880779 (+)
AMCG00001436 gng4 other upstream 301726 3748554 ~ 3765362 (+)
G157369 NA other upstream 2066160 1971881 ~ 2000928 (+)
AMCG00001457 NA other downstream 555840 4623467 ~ 4652000 (+)
AMCG00001480 NA other downstream 1298378 5366005 ~ 5383064 (+)
AMCG00001486 NA other downstream 1526053 5593680 ~ 5633349 (+)
AMCG00001489 NA other downstream 1802348 5869975 ~ 5871430 (+)
AMCG00001493 NA other downstream 1822209 5889836 ~ 5900998 (+)

Expression


Co-expression Network