G158184


Basic Information

Item Value
gene id G158184
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 5708092 ~ 5734559 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199182
tatatatatacactcacctaaaggattattaggaacaccatactaatactgtactgactgtactgtactgtactaatACTCTAACCTCTAGCaacaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatccttcagGTGAGTGTATacatatacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199182 True 459 lncRNA 0.41 2 5708092 5734559

Neighbor

gene id symbol gene type direction distance location
AMCG00001477 acoxl coding upstream 150625 5537336 ~ 5557467 (+)
AMCG00001476 acoxl coding upstream 205824 5491326 ~ 5502268 (+)
AMCG00001475 NA coding upstream 221637 5481284 ~ 5486455 (+)
AMCG00001478 NA coding upstream 239154 5465896 ~ 5468938 (+)
AMCG00001479 NA coding upstream 294556 5403225 ~ 5413536 (+)
AMCG00001488 vip,LOC107597641,LOC107679148,LOC107655780,LOC107585469 coding downstream 85047 5819606 ~ 5826495 (+)
AMCG00001498 NA coding downstream 255703 5990262 ~ 6001627 (+)
AMCG00001497 LOC107578948,LOC107682299 coding downstream 351041 6085600 ~ 6086340 (+)
AMCG00001500 NA coding downstream 450641 6185200 ~ 6191972 (+)
AMCG00001501 NA coding downstream 459703 6194262 ~ 6198251 (+)
G158104 NA non-coding upstream 285000 5421471 ~ 5423092 (+)
G158089 NA non-coding upstream 392856 5313068 ~ 5315236 (+)
G158014 NA non-coding upstream 819740 4888114 ~ 4888352 (+)
G157985 NA non-coding upstream 832948 4872695 ~ 4875144 (+)
G157975 NA non-coding upstream 993932 4713895 ~ 4714160 (+)
G158230 NA non-coding downstream 157487 5892046 ~ 5892246 (+)
G158332 NA non-coding downstream 662361 6396920 ~ 6398188 (+)
G158337 NA non-coding downstream 674462 6409021 ~ 6410557 (+)
G158342 NA non-coding downstream 687441 6422000 ~ 6422235 (+)
G158364 NA non-coding downstream 774735 6509294 ~ 6509630 (+)
AMCG00001486 NA other upstream 74743 5593680 ~ 5633349 (+)
AMCG00001480 NA other upstream 325028 5366005 ~ 5383064 (+)
AMCG00001457 NA other upstream 1056092 4623467 ~ 4652000 (+)
AMCG00001430 srf other upstream 1645759 4045356 ~ 4062333 (+)
AMCG00001433 NA other upstream 1684182 4022797 ~ 4023910 (+)
AMCG00001489 NA other downstream 135416 5869975 ~ 5871430 (+)
AMCG00001493 NA other downstream 155277 5889836 ~ 5900998 (+)
AMCG00001509 sf3b5 other downstream 659544 6394103 ~ 6395960 (+)
G158478 NA other downstream 1140209 6874768 ~ 6876578 (+)
G158537 NA other downstream 1288829 7023388 ~ 7028141 (+)

Expression


Co-expression Network