G158364


Basic Information

Item Value
gene id G158364
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 6509294 ~ 6509630 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199387
CCACCCTCACTCTGTGTGCTGCCACAGGCACTGACTGGGAACTGGAACAAGGCAAAGCCAGCAGTGGTGCCAACAGGGCTGCAGGGGGCGCCCTGACCCCCCAGCAGGCTGACGGTGTCAAGGCTCAGCGGAGGCCTGGTCACATTCCTGGGTACTACAACCACAAACTGACCATCCGTGGTGCATTGCACAGTCactggagggagaggggagaagaTTAGCAAAG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU199387 True 226 lncRNA 0.60 2 6509294 6509630

Neighbor

gene id symbol gene type direction distance location
AMCG00001511 NA coding upstream 126086 6381967 ~ 6383208 (+)
AMCG00001510 NA coding upstream 256073 6225995 ~ 6253221 (+)
AMCG00001501 NA coding upstream 311043 6194262 ~ 6198251 (+)
AMCG00001500 NA coding upstream 317322 6185200 ~ 6191972 (+)
AMCG00001497 LOC107578948,LOC107682299 coding upstream 422954 6085600 ~ 6086340 (+)
AMCG00001512 NA coding downstream 32043 6541673 ~ 6545924 (+)
AMCG00001507 pgbd5,LOC107743535,LOC107552948,LOC107725485,LOC106589661,LOC106610742 coding downstream 54178 6563808 ~ 6591290 (+)
AMCG00001515 LOC107580738 coding downstream 226467 6736097 ~ 6741940 (+)
AMCG00001517 abcb10 coding downstream 234075 6743705 ~ 6752893 (+)
AMCG00001518 NA coding downstream 244101 6753731 ~ 6770900 (+)
G158342 NA non-coding upstream 87059 6422000 ~ 6422235 (+)
G158337 NA non-coding upstream 98737 6409021 ~ 6410557 (+)
G158332 NA non-coding upstream 111106 6396920 ~ 6398188 (+)
G158230 NA non-coding upstream 617048 5892046 ~ 5892246 (+)
G158184 NA non-coding upstream 774735 5708092 ~ 5734559 (+)
G158435 NA non-coding downstream 277774 6787404 ~ 6788972 (+)
G158539 NA non-coding downstream 518557 7028187 ~ 7036066 (+)
G158548 NA non-coding downstream 546218 7055848 ~ 7056061 (+)
G158555 NA non-coding downstream 648620 7158250 ~ 7160609 (+)
G158571 NA non-coding downstream 659903 7169533 ~ 7169767 (+)
AMCG00001509 sf3b5 other upstream 113334 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 608296 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 637864 5869975 ~ 5871430 (+)
AMCG00001486 NA other upstream 875945 5593680 ~ 5633349 (+)
AMCG00001480 NA other upstream 1126230 5366005 ~ 5383064 (+)
G158478 NA other downstream 365138 6874768 ~ 6876578 (+)
G158537 NA other downstream 513758 7023388 ~ 7028141 (+)
AMCG00001550 NA other downstream 1161684 7671314 ~ 7679783 (+)
G158672 NA other downstream 1226885 7736515 ~ 7737890 (+)
G158676 NA other downstream 1237051 7746681 ~ 7746980 (+)

Expression


Co-expression Network