Gene
RNA
| Item | Value |
|---|---|
| gene id | G158478 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 6874768 ~ 6876578 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005911 | cell-cell junction | cellular_component |
| GO:0005921 | gap junction | cellular_component |
| GO:0005922 | connexin complex | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU199525 | True | 387 | TUCP | 0.56 | 2 | 6874768 | 6876578 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001528 | NA | coding | upstream | 673 | 6871764 ~ 6874095 (+) |
| AMCG00001522 | NA | coding | upstream | 11384 | 6861191 ~ 6863384 (+) |
| AMCG00001516 | NA | coding | upstream | 87748 | 6779662 ~ 6787020 (+) |
| AMCG00001519 | actc1a,act2,zgc:86709,LOC105024319,LOC100534413 | coding | upstream | 98082 | 6772496 ~ 6776686 (+) |
| AMCG00001518 | NA | coding | upstream | 103868 | 6753731 ~ 6770900 (+) |
| AMCG00001529 | LOC107717858 | coding | downstream | 60769 | 6937347 ~ 6943146 (+) |
| AMCG00001531 | ppm1g,LOC107660231 | coding | downstream | 123863 | 7000441 ~ 7010715 (+) |
| AMCG00001532 | NA | coding | downstream | 135327 | 7011905 ~ 7015337 (+) |
| AMCG00001541 | NA | coding | downstream | 140351 | 7016929 ~ 7020818 (+) |
| AMCG00001542 | adss,LOC107666526,LOC107375820,LOC107733748 | coding | downstream | 236074 | 7112652 ~ 7133015 (+) |
| G158435 | NA | non-coding | upstream | 85796 | 6787404 ~ 6788972 (+) |
| G158364 | NA | non-coding | upstream | 365138 | 6509294 ~ 6509630 (+) |
| G158342 | NA | non-coding | upstream | 452533 | 6422000 ~ 6422235 (+) |
| G158337 | NA | non-coding | upstream | 464211 | 6409021 ~ 6410557 (+) |
| G158332 | NA | non-coding | upstream | 476580 | 6396920 ~ 6398188 (+) |
| G158539 | NA | non-coding | downstream | 151609 | 7028187 ~ 7036066 (+) |
| G158548 | NA | non-coding | downstream | 179270 | 7055848 ~ 7056061 (+) |
| G158555 | NA | non-coding | downstream | 281672 | 7158250 ~ 7160609 (+) |
| G158571 | NA | non-coding | downstream | 292955 | 7169533 ~ 7169767 (+) |
| G158580 | NA | non-coding | downstream | 435566 | 7312144 ~ 7313758 (+) |
| AMCG00001509 | sf3b5 | other | upstream | 478808 | 6394103 ~ 6395960 (+) |
| AMCG00001493 | NA | other | upstream | 973770 | 5889836 ~ 5900998 (+) |
| AMCG00001489 | NA | other | upstream | 1003338 | 5869975 ~ 5871430 (+) |
| AMCG00001486 | NA | other | upstream | 1241419 | 5593680 ~ 5633349 (+) |
| AMCG00001480 | NA | other | upstream | 1491704 | 5366005 ~ 5383064 (+) |
| G158537 | NA | other | downstream | 146810 | 7023388 ~ 7028141 (+) |
| AMCG00001550 | NA | other | downstream | 794736 | 7671314 ~ 7679783 (+) |
| G158672 | NA | other | downstream | 859937 | 7736515 ~ 7737890 (+) |
| G158676 | NA | other | downstream | 870103 | 7746681 ~ 7746980 (+) |
| G158725 | kat14,LOC106584902 | other | downstream | 1056578 | 7933156 ~ 7933555 (+) |
