G158571


Basic Information

Item Value
gene id G158571
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7169533 ~ 7169767 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199643
AAACAGTAAAGATGATAAGTAGAAAATACAGAATTTGACCACATATTCTAATGATTTAATGATCAATACTTTCAAATGAGATGTAATTAAAGTATGAAATAATGGTTGCCCTCACACCACATACACTTAATTTGACTTTCAGAAGACTGATTGTGTCCACAGCCAACAACATGAATGATGGCACAAGAAAACAGCCggcaaacacaaaataatagcCTACTGTAGATTATagcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199643 True 235 lncRNA 0.33 1 7169533 7169767

Neighbor

gene id symbol gene type direction distance location
AMCG00001542 adss,LOC107666526,LOC107375820,LOC107733748 coding upstream 36518 7112652 ~ 7133015 (+)
AMCG00001541 NA coding upstream 148715 7016929 ~ 7020818 (+)
AMCG00001532 NA coding upstream 154196 7011905 ~ 7015337 (+)
AMCG00001531 ppm1g,LOC107660231 coding upstream 158818 7000441 ~ 7010715 (+)
AMCG00001529 LOC107717858 coding upstream 226387 6937347 ~ 6943146 (+)
AMCG00001536 NA coding downstream 100651 7270418 ~ 7296604 (+)
AMCG00001535 akt3,LOC107747540,LOC105912451,LOC107666430,LOC107698756 coding downstream 130423 7300190 ~ 7305321 (+)
AMCG00001539 NA coding downstream 222306 7392073 ~ 7410053 (+)
AMCG00001540 NA coding downstream 252043 7421810 ~ 7452801 (+)
AMCG00001548 NA coding downstream 361179 7530946 ~ 7549993 (+)
G158555 NA non-coding upstream 8924 7158250 ~ 7160609 (+)
G158548 NA non-coding upstream 113472 7055848 ~ 7056061 (+)
G158539 NA non-coding upstream 133467 7028187 ~ 7036066 (+)
G158435 NA non-coding upstream 380561 6787404 ~ 6788972 (+)
G158364 NA non-coding upstream 659903 6509294 ~ 6509630 (+)
G158580 NA non-coding downstream 142377 7312144 ~ 7313758 (+)
G158621 NA non-coding downstream 405147 7574914 ~ 7575132 (+)
G158631 NA non-coding downstream 491817 7661584 ~ 7664572 (+)
G158667 NA non-coding downstream 557783 7727550 ~ 7728815 (+)
G158668 NA non-coding downstream 559786 7729553 ~ 7731701 (+)
G158537 NA other upstream 141392 7023388 ~ 7028141 (+)
G158478 NA other upstream 292955 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 773573 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1268535 5889836 ~ 5900998 (+)
AMCG00001489 NA other upstream 1298103 5869975 ~ 5871430 (+)
AMCG00001550 NA other downstream 501547 7671314 ~ 7679783 (+)
G158672 NA other downstream 566748 7736515 ~ 7737890 (+)
G158676 NA other downstream 576914 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 763389 7933156 ~ 7933555 (+)
G158836 NA other downstream 989379 8159146 ~ 8161815 (+)

Expression


Co-expression Network