G158671


Basic Information

Item Value
gene id G158671
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7735276 ~ 7735610 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199778
attttaaacatacatattttatatttacacatgtaataagactgtacaatgcactagttagagctcaacTGGATAaggtgtacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacatggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcggggacacaaatggaaattgggcttcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199778 True 335 lncRNA 0.43 1 7735276 7735610

Neighbor

gene id symbol gene type direction distance location
AMCG00001560 NA coding upstream 15165 7718794 ~ 7720111 (+)
AMCG00001558 gtpbp2,LOC108263131,LOC107751133,LOC102796526 coding upstream 24451 7696288 ~ 7710825 (+)
AMCG00001559 LOC105902337 coding upstream 46878 7686384 ~ 7688398 (+)
AMCG00001548 NA coding upstream 185283 7530946 ~ 7549993 (+)
AMCG00001540 NA coding upstream 282475 7421810 ~ 7452801 (+)
AMCG00001556 LOC104967701 coding downstream 39232 7774842 ~ 7792880 (+)
AMCG00001571 NA coding downstream 118534 7854144 ~ 7859415 (+)
AMCG00001573 pnpt1,LOC106607983 coding downstream 135543 7871153 ~ 7881358 (+)
AMCG00001572 smek2,ppp4r3b coding downstream 147106 7882716 ~ 7895972 (+)
AMCG00001574 NA coding downstream 173588 7909198 ~ 7917326 (+)
G158668 NA non-coding upstream 3575 7729553 ~ 7731701 (+)
G158667 NA non-coding upstream 6461 7727550 ~ 7728815 (+)
G158631 NA non-coding upstream 70704 7661584 ~ 7664572 (+)
G158621 NA non-coding upstream 160144 7574914 ~ 7575132 (+)
G158580 NA non-coding upstream 421518 7312144 ~ 7313758 (+)
G158673 NA non-coding downstream 5016 7740626 ~ 7741056 (+)
G158675 NA non-coding downstream 7948 7743558 ~ 7744033 (+)
G158677 NA non-coding downstream 16792 7752402 ~ 7752770 (+)
G158713 NA non-coding downstream 163833 7899443 ~ 7901353 (+)
G158726 NA non-coding downstream 198048 7933658 ~ 7933858 (+)
AMCG00001550 NA other upstream 55493 7671314 ~ 7679783 (+)
G158537 NA other upstream 707135 7023388 ~ 7028141 (+)
G158478 NA other upstream 858698 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 1339316 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1834278 5889836 ~ 5900998 (+)
G158672 NA other downstream 905 7736515 ~ 7737890 (+)
G158676 NA other downstream 11071 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 197546 7933156 ~ 7933555 (+)
G158836 NA other downstream 423536 8159146 ~ 8161815 (+)
G159174 NA other downstream 2177698 9913308 ~ 9914664 (+)

Expression


Co-expression Network