G158672


Basic Information

Item Value
gene id G158672
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7736515 ~ 7737890 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199779
ggtctacattttttccagagccgtatagtttatacacattttgaagtgtgtttttcacttttgcacATGAtatgatttgatttggtctagcgagtaatacaaaaaagaataaagcaaACCGATACACTTAACTTTGATGTAATATGCACATCCTATTAAGTTAcccttttaaaaaattaaataaattgaattatggACTTGATATTATCAGTGTGCTGTTTATCTCTTGATTCACATCCCCCTGTACAAAAACTGAAGTTCAAATCAATAAGTCATCAAAATGATTTTAACCCTTTGTAAGAAGCTCATTTAATAAGCATAATGCACTACTGAAGGCTCTACTCATGCAGGGTCCCCTCCCCCCGAATGTAGATCCAGGACAAATGCTCAGCTTCCACCTTTTTGGACCTGAACAGCTGGCTGTCAGGCTAAATAAAACAAGGGCAGTTGCTTTCACCTGCAGTGTTTGCTTACTGGATGTAACAATGCCCAGCAGTTAAAGCTATACTGCCAAAAATCAGAGAGTGGGGTATACCAAACTGGTTAAAAGACATAGATAGGTAAACATTAGGTAATCGATTGAAAATGTAACTCATCAATATCCTGCTTTAATTTGGATTAAACAGGAGTTTGTATTAGAGCTATAGATTAAAATCCAGGTAATGACACTGAACATTCAATGTCtgtgttggtgttgtttttttccttagcGATTTTAGTAAATAAGAAAGTTAGGTTACTTCTTGGGCCGTgaggaaacaaaaggaaaccatTCTGAAGGAAAAAGCCAGGCTATACAGACAGGAAACACAATGAACTGAAGCAGAAATAACTAGAGTCCCACTCTCAAATTCCAGGCCCAAGAGTGCAGCCTTAGTCCTGTGACTAAAAAGCGTGGGTGAAGAAATCTCGGTCACACTCACCGCTGACGAAGGGGTTGCTGCGAGTCTGCGCCCGGGTCAGCGCACTCTGCACGGCCTGCTGGAAGTTCTTGCCCGGCGTGGGCTGCTGGGTGTACATGGAGTAGATGGAGCTGGCCGCCAACGTCTGCGGCTTCCGGAAGGGCTGGTTGCCCTGCTCCTTGGCTGGGATCTCGGGGGTGAAAGGTCGCACCGTGGCAGCAGGGGGTGTCTCTTGCTTGGAGGGCAGGGGCAGGGTGTGGCTCTGCGAGGAGGGGATGGAGAGTCTGTGCTGGGAGGCCTGCGTGTTGGGGGGCTGCTGCTGGCTAGGCGGTTTGGTCTTGCCGGGGAATGTCCCTGTGCCAGGCAGCTTCCCGTAGGCGGGCTGCCCATGTAGACCACCAGAGGGCAGGTTGACTGGTTTTGGCTTGCTGGGCACAGGCGGGGGGACCTTAACTGGGGCCTTTGCAGCATTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199779 True 1376 TUCP 0.47 1 7736515 7737890

Neighbor

gene id symbol gene type direction distance location
AMCG00001560 NA coding upstream 16404 7718794 ~ 7720111 (+)
AMCG00001558 gtpbp2,LOC108263131,LOC107751133,LOC102796526 coding upstream 25690 7696288 ~ 7710825 (+)
AMCG00001559 LOC105902337 coding upstream 48117 7686384 ~ 7688398 (+)
AMCG00001548 NA coding upstream 186522 7530946 ~ 7549993 (+)
AMCG00001540 NA coding upstream 283714 7421810 ~ 7452801 (+)
AMCG00001556 LOC104967701 coding downstream 36952 7774842 ~ 7792880 (+)
AMCG00001571 NA coding downstream 116254 7854144 ~ 7859415 (+)
AMCG00001573 pnpt1,LOC106607983 coding downstream 133263 7871153 ~ 7881358 (+)
AMCG00001572 smek2,ppp4r3b coding downstream 144826 7882716 ~ 7895972 (+)
AMCG00001574 NA coding downstream 171308 7909198 ~ 7917326 (+)
G158671 NA non-coding upstream 905 7735276 ~ 7735610 (+)
G158668 NA non-coding upstream 4814 7729553 ~ 7731701 (+)
G158667 NA non-coding upstream 7700 7727550 ~ 7728815 (+)
G158631 NA non-coding upstream 71943 7661584 ~ 7664572 (+)
G158621 NA non-coding upstream 161383 7574914 ~ 7575132 (+)
G158673 NA non-coding downstream 2736 7740626 ~ 7741056 (+)
G158675 NA non-coding downstream 5668 7743558 ~ 7744033 (+)
G158677 NA non-coding downstream 14512 7752402 ~ 7752770 (+)
G158713 NA non-coding downstream 161553 7899443 ~ 7901353 (+)
G158726 NA non-coding downstream 195768 7933658 ~ 7933858 (+)
AMCG00001550 NA other upstream 56732 7671314 ~ 7679783 (+)
G158537 NA other upstream 708374 7023388 ~ 7028141 (+)
G158478 NA other upstream 859937 6874768 ~ 6876578 (+)
AMCG00001509 sf3b5 other upstream 1340555 6394103 ~ 6395960 (+)
AMCG00001493 NA other upstream 1835517 5889836 ~ 5900998 (+)
G158676 NA other downstream 8791 7746681 ~ 7746980 (+)
G158725 kat14,LOC106584902 other downstream 195266 7933156 ~ 7933555 (+)
G158836 NA other downstream 421256 8159146 ~ 8161815 (+)
G159174 NA other downstream 2175418 9913308 ~ 9914664 (+)
AMCG00001630 NA other downstream 2419844 10157734 ~ 10159826 (+)

Expression


Co-expression Network