G158677


Basic Information

Item Value
gene id G158677
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 7752402 ~ 7752770 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU199784
GCGGCACATTTCAGCCAGGTAACACTCGGTCTCTCCTGGTTCCTTGCACAGCTCCACCACATCCCGACAGGAAGTCTCAGGGGTGATGGGCACCTCCGTAAAATGCTGGTCATTGTTACTGAGGTATACAGTCAGGAACATCTGagaaacggagagagagagagagagaggaataggGGAGGGAGCTCATCAGAACAGCATAGATATGTAGGAATTGTTTTGGTATACATGCACAGTAACCTCTACTGACTGGCCTGGGGCAGAAACAACACACGAAACATTAAAGTGTTTGCTGACATTTAAATTAGAGAAAGGAGAGGAGGTGAAAGACACAGACTGAACAGTAAGTAAAACGAAAGCATTCCTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU199784 True 369 lncRNA 0.47 1 7752402 7752770

Neighbor

gene id symbol gene type direction distance location
AMCG00001560 NA coding upstream 32291 7718794 ~ 7720111 (+)
AMCG00001558 gtpbp2,LOC108263131,LOC107751133,LOC102796526 coding upstream 41577 7696288 ~ 7710825 (+)
AMCG00001559 LOC105902337 coding upstream 64004 7686384 ~ 7688398 (+)
AMCG00001548 NA coding upstream 202409 7530946 ~ 7549993 (+)
AMCG00001540 NA coding upstream 299601 7421810 ~ 7452801 (+)
AMCG00001556 LOC104967701 coding downstream 22072 7774842 ~ 7792880 (+)
AMCG00001571 NA coding downstream 101374 7854144 ~ 7859415 (+)
AMCG00001573 pnpt1,LOC106607983 coding downstream 118383 7871153 ~ 7881358 (+)
AMCG00001572 smek2,ppp4r3b coding downstream 129946 7882716 ~ 7895972 (+)
AMCG00001574 NA coding downstream 156428 7909198 ~ 7917326 (+)
G158675 NA non-coding upstream 8369 7743558 ~ 7744033 (+)
G158673 NA non-coding upstream 11346 7740626 ~ 7741056 (+)
G158671 NA non-coding upstream 16792 7735276 ~ 7735610 (+)
G158668 NA non-coding upstream 20701 7729553 ~ 7731701 (+)
G158667 NA non-coding upstream 23587 7727550 ~ 7728815 (+)
G158713 NA non-coding downstream 146673 7899443 ~ 7901353 (+)
G158726 NA non-coding downstream 180888 7933658 ~ 7933858 (+)
G158727 NA non-coding downstream 181203 7933973 ~ 7934875 (+)
G158728 NA non-coding downstream 182304 7935074 ~ 7935289 (+)
G158729 NA non-coding downstream 183502 7936272 ~ 7936478 (+)
G158676 NA other upstream 5422 7746681 ~ 7746980 (+)
G158672 NA other upstream 14512 7736515 ~ 7737890 (+)
AMCG00001550 NA other upstream 72619 7671314 ~ 7679783 (+)
G158537 NA other upstream 724261 7023388 ~ 7028141 (+)
G158478 NA other upstream 875824 6874768 ~ 6876578 (+)
G158725 kat14,LOC106584902 other downstream 180386 7933156 ~ 7933555 (+)
G158836 NA other downstream 406376 8159146 ~ 8161815 (+)
G159174 NA other downstream 2160538 9913308 ~ 9914664 (+)
AMCG00001630 NA other downstream 2404964 10157734 ~ 10159826 (+)
AMCG00001643 spred2 other downstream 2902417 10655187 ~ 10677854 (+)

Expression


Co-expression Network