Gene
RNA
| Item | Value |
|---|---|
| gene id | G159142 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 9316111 ~ 9369910 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200359 | True | 363 | lncRNA | 0.25 | 2 | 9316111 | 9369910 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001626 | NA | coding | upstream | 69108 | 9236411 ~ 9247003 (+) |
| AMCG00001618 | ndufaf5 | coding | upstream | 86113 | 9218629 ~ 9229998 (+) |
| AMCG00001616 | ism1,LOC107662810,LOC103134171,LOC103134168 | coding | upstream | 161095 | 9150017 ~ 9155016 (+) |
| AMCG00001617 | LOC107600566,LOC107654988,LOC107662809 | coding | upstream | 180748 | 9093769 ~ 9135363 (+) |
| AMCG00001613 | btbd3 | coding | upstream | 287317 | 9017866 ~ 9028794 (+) |
| AMCG00001634 | snrpb2,LOC107684252 | coding | downstream | 597505 | 9967415 ~ 9970362 (+) |
| AMCG00001635 | NA | coding | downstream | 601443 | 9971353 ~ 9972980 (+) |
| AMCG00001633 | pcsk2,LOC107699156,LOC106607177 | coding | downstream | 644313 | 10014223 ~ 10050694 (+) |
| AMCG00001631 | LOC103355666,LOC100697573,LOC101465959,LOC102795325,LOC106577087,LOC108243857 | coding | downstream | 725450 | 10095360 ~ 10097803 (+) |
| AMCG00001632 | LOC107580235 | coding | downstream | 804222 | 10174132 ~ 10177898 (+) |
| G159101 | NA | non-coding | upstream | 101764 | 9210120 ~ 9214347 (+) |
| G159041 | NA | non-coding | upstream | 538366 | 8776937 ~ 8777745 (+) |
| G158857 | NA | non-coding | upstream | 1011271 | 8302550 ~ 8304840 (+) |
| G158837 | NA | non-coding | upstream | 1058922 | 8165773 ~ 8257189 (+) |
| G158823 | mrpl14 | non-coding | upstream | 1213696 | 8101451 ~ 8102415 (+) |
| G159170 | NA | non-coding | downstream | 493050 | 9862960 ~ 9863228 (+) |
| G159169 | NA | non-coding | downstream | 499258 | 9869168 ~ 9869603 (+) |
| G159204 | NA | non-coding | downstream | 700020 | 10069930 ~ 10070334 (+) |
| G159250 | NA | non-coding | downstream | 945151 | 10315061 ~ 10319144 (+) |
| G159273 | NA | non-coding | downstream | 1072037 | 10441947 ~ 10448746 (+) |
| G158836 | NA | other | upstream | 1154296 | 8159146 ~ 8161815 (+) |
| G158725 | kat14,LOC106584902 | other | upstream | 1382556 | 7933156 ~ 7933555 (+) |
| G158676 | NA | other | upstream | 1569131 | 7746681 ~ 7746980 (+) |
| G158672 | NA | other | upstream | 1578221 | 7736515 ~ 7737890 (+) |
| AMCG00001550 | NA | other | upstream | 1636328 | 7671314 ~ 7679783 (+) |
| G159174 | NA | other | downstream | 543398 | 9913308 ~ 9914664 (+) |
| AMCG00001630 | NA | other | downstream | 787824 | 10157734 ~ 10159826 (+) |
| AMCG00001643 | spred2 | other | downstream | 1285277 | 10655187 ~ 10677854 (+) |
| AMCG00001645 | NA | other | downstream | 1377579 | 10747489 ~ 10757858 (+) |
| AMCG00001691 | NA | other | downstream | 2960069 | 12329979 ~ 12333700 (+) |
