G159746



Basic Information


Item Value
gene id G159746
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 12511622 ~ 12512279 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU201106
TTAAATTCCAACCTTCaagttcaataataataacaataatcttaATAATTGGGATACATTTAATAGGCTTGGGTAAATGAAAATTCTCTTGATGTCCAAACACCAAGAGAAATCAAGATATTGCCATATGACTTACCAATCAAACTGAAACATTTGCGGACTTTCACAGTGGGAATCAGCAATGTTTCTCTAAGGTAATCCGCTAACTGTCCACCCATAAGAGCCAGCAGCCAACAGCCCAGATATGGCAGCGCAGACAAAAAGCCATTCTAcgtggggaaaaaagaagagTCAGATTACCACGAGCAATGTTTCATCAGCTGTTGTAATCACATTCCTAAATCAGGGCATGATCTTAATTTTGTATGTTGCTGATGCACACTTAAATgcaccaaaaagaaaaacatggtcTACAATTCCAGTGGGTATCCATTTCTAAGTATACGAGAGGATAATGGTTTGTTGAATGATCCGTTTGAAACAACAGGAGTCCCGTTACCTGCTGTATATTGAATCCGAGAACATTTTTCATGTAGGTGGGCAGTAATGTAAGCAGAGTGTAAAAAGTCCAGTTGTAAGAAAAATGGGCCACAACAATGGCCCATAGTGGGAGAGACTTCAGGATAGCCTTCCAGGGAATGTGCTTAGATGAGGAAGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU201106 True 658 lncRNA 0.39 1 12511622 12512279

Neighbor


gene id symbol gene type direction distance location
AMCG00001685 NA coding downstream 197593 12311180 ~ 12314029 (-)
AMCG00001675 NA coding downstream 377843 11950262 ~ 12133779 (-)
AMCG00001683 papolg coding downstream 969215 11530107 ~ 11542407 (-)
AMCG00001681 rel coding downstream 987736 11509835 ~ 11523886 (-)
AMCG00001680 NA coding downstream 1017736 11488495 ~ 11493886 (-)
AMCG00001694 NA coding upstream 15004 12527283 ~ 12541555 (-)
AMCG00001696 NA coding upstream 31729 12544008 ~ 12576570 (-)
AMCG00001697 NA coding upstream 151278 12663557 ~ 12663916 (-)
AMCG00001701 rims1,LOC102293251 coding upstream 165193 12677472 ~ 12760544 (-)
AMCG00001700 NA coding upstream 313298 12825577 ~ 12832334 (-)
G159745 slc17a5 non-coding downstream 1329 12509800 ~ 12510293 (-)
G159744 NA non-coding downstream 1893 12509220 ~ 12509729 (-)
G159743 NA non-coding downstream 3155 12508214 ~ 12508467 (-)
G159737 NA non-coding downstream 8387 12500332 ~ 12503235 (-)
G159712 NA non-coding downstream 177921 12331792 ~ 12333701 (-)
G159747 NA non-coding upstream 73 12512352 ~ 12512904 (-)
G159748 NA non-coding upstream 1113 12513392 ~ 12515078 (-)
G159818 NA non-coding upstream 274803 12787082 ~ 12793561 (-)
G159904 NA non-coding upstream 1238601 13750880 ~ 13751089 (-)
G159995 NA non-coding upstream 1663462 14175741 ~ 14203768 (-)
G159303 NA other downstream 1840381 10670437 ~ 10671241 (-)
AMCG00001628 NA other downstream 2289904 10212874 ~ 10221718 (-)
AMCG00001625 NA other downstream 2546214 9952372 ~ 9965408 (-)
AMCG00001615 NA other downstream 3408588 9074089 ~ 9103034 (-)
G158971 map1lc3c,LOC107701141 other downstream 3971364 8514367 ~ 8540258 (-)
AMCG00001702 NA other upstream 418952 12931231 ~ 12937243 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other upstream 430082 12942361 ~ 12977026 (-)
AMCG00001710 NA other upstream 483358 12995637 ~ 13105424 (-)
G159976 NA other upstream 1635349 14147628 ~ 14151555 (-)
AMCG00001733 NA other upstream 1951451 14463730 ~ 14473159 (-)

Expression



Co-expression Network