G159976


Basic Information

Item Value
gene id G159976
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14147628 ~ 14151555 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU201414
GGAGGGCTTGTCGGTTTCACTGTTGATCTCGGCACTCAGGTCATCCTCAGACAAGACACCCTGGGCACTTTCCTTTGATTGACTGATGCTGTCTTTTAAGTCACACAGATCTAGCCTGTGATCTTCAGGTATGTTTAatgctttttccttttcagtacAGGGAAGAGTTTGGTTTCCATCCTTACATAAACTGTTTTCTAGAAGATCGCTGATTTTACTCGCCACTTCCTTGAACATCGTAGGGTCATCATTAGCGGAAGCAGCATGAAGGATCTGCAGCAGCTGGGACTGGATCTTCTCTGCCGCGTGAGCAGACTTCACATCAAGCTGGTTTGCttcaaaagacacattttcctttcttccagACAGTTCACAGGTCTTTGACTGTGGGCCTTCTTGTTTTAACAAGTCAATAAGCAGGTCAGGACTTTTGCTGTCAATATGACTAAATGGATGTTCTTTCTCCTCATAGCATGAAGCTGCACCTGCTCTGACAGTTCCACTGGGCTCCTGcacattttttatcattttgattATGTCTTCGATGACTTTGATTTCTGCCTTTTGTACAACATCTGCACCTGGATCTTCCACTTGCATGTTAACTAATTCAAGCAGACTTGACCGTAATGCACTATGGAGATCTGGCCATTCTGGTGTAGCCAAGTCTTCTTGAACTGAGCCTGTATGTCCAACTAGTaccttgtctgtattcagatctaCGGCAGGGGAACAGTCTATTTCACTACCCTTTTGGTGTCTGCTATTAGCTAAGCTGCCTGTATCCACTGTGAGTGTTGTTTCACATGCTAGACCCCGACTGTCAGATGCACTGCTTCCGTCAAAACTGTCCCGTGAATGCTGATCTCTCACACTTAATGAAACTTCATTTTCAGAAGATGTTCCACAACACTGTTCAGGAATTCCCTGGAAAGGACCTGCACCTTCTAACAAATGTGTGTCCAGCTCTGACCTTAGTCCTGTGCCTGGATCATCCTTAGATATGCCAGGCAGATCATTCACATTATGACTTACAACATCCTTCAAAATGTGCTCTGTAAGGACTTCATTTTCAGAAGATGTTCCACAACACTGTTCAGGAATTCCCTGGAAAGGACCTGCACCTTTTAACAAATGTGTGACCTGCTCTGGCCTTAGTCCTGTGCCTGGATCATCCTTAGCAATGCCGGGCGGATTGTTCACATTATGACTTTCAACGTCCTTCAAAATGTGCTCTTTAGGGACAGTTATTGATAAATCAGAGCCACAGTCTCCCATACCCTCCACTGTATCTCTAACGCTCTCTTGCTCAAACGTTACATCTTCTGCCAATGAAAAGGAACTGCTTGTTTGTAAGGGCAAAGCATCTGCTTGGTGTTCAGGACTTTTTCCACCTGGTACAAGctcatcagagagagagagtgaatcaCATACAGATGGTGTATCAGGTTTTTGTTCTGATTCAAGGGACCagtttgtaaatgtactgtCATTGCTATCAGCCTCCTTGAAGCTGTccgttttgttttcttcagttaagGTATCACCACGTGACGTACAGGACATATCTGACTCACCCTGATTCACGATTCCATTCGGATGTATAACTGATCCACTGTATCCTTTGTCAGACTCTAACTCAATGGAGTGTTGTAATGTTTCATTCCTAGATAAGGTGGTTTGCTTTTCACTTACACTTAGAGACACTGAATTGCTGTCAACTTCATGGAATTCAGGCTTTTCTGCTTGACACCGTTCATCCAAGAAGTCATCATCAATCTGGCTATGTCTAAGGATGTTTTCTATGGACAGATGCAGCTCTGTTGAATTCTGTATCATACCTCCTTCCTCTAACTGTGTGGATAAAACTGACAGGTTGCTCTGCTTATCTGTACATTCCTTACTAAGGATTTCTGGAAGATGGAACAGTTCTTTGAGCTGAGGGTCCACAACGCCAGAACCTTCCATCTGCAAGCTTGTGCCTTTCATTTTTTCAGattcatgtacatttttctCCACACTATCTCCTTCAGTGTGAGAAGGATGTTCAGTAACCTGCTCATCTATACGTTCAAGCTCAGTCTTCCCGTTTTCCTCTTTGTAACCCACAATTCCACCAGAAATAGCCTGTCCGTCCAGCAGCTTCCTATTAGTGTCATCATCCAGCAGGCCTAGTCTCAGACCTTCAGGAATACTGTGAACTGCTCCCCTCTCTGGGCCAATTATAGCATCAACAACCATTTCAGAGTTTATAATATTTTCAGCAACATCTTCATTAATTAGACCTCGTTGCACTGCCTCACTGATACTAATAGTTTTTCCAGTATTAACGTCATAGAAACCAGACAGTATGTGCAGTTTCTCCATAACTTGAAGAGCAATATGGCGTGTTATTAAGCTGCTTCCCACTGCTTCCCTCAGGGTTATTTTGGTTCCTGTTTGGGCATCAACGATTCCACCGTTCTGAAACTGCAAAGCCAAAACATCTACGGCGATCTCCTCATCAACAAGTCCTTTCTCTAGGGCTGCATTAATATCATACCGATTACCTGAAGTAACATCCAAAATCCCACCTTCTTCCACTTGTGCTCTCAAAAGTTGGAcagcattctctctctctaatgtgTCTGGCCTGGCTCTCTCTGAAAGGAACTGTTCTCCAGTGCTTTCCACGTCTGTGTTTAATTTACCAGTCAATTCTGCAGTCTCGGTCAGttctgtcatttgttttggaaattcAAAGTCATCTGGTGTTCTGGTTCGATTGTTTATGTTTGCAGAAGCAATCTCACTTGGAAACGAGCTGGTGACGGCATGATACGAGACTTCTCTGCCCTCCTCTAGAGCAGCTATGCTCAATTCTTTTCTCAGTCCTGTTTCTGTGATATCACTTATATTCAATATCTCTTTGGATGGCACACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201414 True 2923 TUCP 0.43 2 14147628 14151555

Neighbor

gene id symbol gene type direction distance location
AMCG00001729 NA coding downstream 77753 14060233 ~ 14069875 (-)
AMCG00001726 NA coding downstream 87902 14057676 ~ 14059726 (-)
AMCG00001728 NA coding downstream 106448 14038870 ~ 14041180 (-)
AMCG00001727 prim2,LOC107743543,LOC107725490,LOC107676604,LOC102784181,LOC108443732,LOC108263846 coding downstream 162301 13978613 ~ 13985327 (-)
AMCG00001715 NA coding downstream 238658 13823609 ~ 13908970 (-)
AMCG00001744 NA coding upstream 189203 14340758 ~ 14343171 (-)
AMCG00001743 hcrtr2,LOC107699124,LOC107597943 coding upstream 196538 14348093 ~ 14359579 (-)
AMCG00001731 NA coding upstream 213892 14365447 ~ 14380677 (-)
AMCG00001732 NA coding upstream 246980 14398535 ~ 14421490 (-)
AMCG00001735 NA coding upstream 273720 14425275 ~ 14431342 (-)
G159904 NA non-coding downstream 396539 13750880 ~ 13751089 (-)
G159818 NA non-coding downstream 1354067 12787082 ~ 12793561 (-)
G159748 NA non-coding downstream 1632550 12513392 ~ 12515078 (-)
G159747 NA non-coding downstream 1634724 12512352 ~ 12512904 (-)
G159746 NA non-coding downstream 1635349 12511622 ~ 12512279 (-)
G159995 NA non-coding upstream 24186 14175741 ~ 14203768 (-)
G160025 NA non-coding upstream 115832 14267387 ~ 14267741 (-)
G160040 NA non-coding upstream 159586 14311141 ~ 14316143 (-)
G160080 NA non-coding upstream 269382 14420937 ~ 14517285 (-)
G160085 NA non-coding upstream 322687 14474242 ~ 14480359 (-)
AMCG00001710 NA other downstream 1042204 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 1170602 12942361 ~ 12977026 (-)
AMCG00001702 NA other downstream 1210385 12931231 ~ 12937243 (-)
G159303 NA other downstream 3476387 10670437 ~ 10671241 (-)
AMCG00001628 NA other downstream 3925910 10212874 ~ 10221718 (-)
AMCG00001733 NA other upstream 312175 14463730 ~ 14473159 (-)
AMCG00001756 NA other upstream 399134 14550689 ~ 14570927 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 1347998 15499553 ~ 15501793 (-)
G160255 NA other upstream 1352756 15504311 ~ 15520639 (-)
AMCG00001784 NA other upstream 1540014 15691569 ~ 15702500 (-)

Expression


Co-expression Network