G160024


Basic Information

Item Value
gene id G160024
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14267388 ~ 14267722 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU201465
aaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctaacattgcgtttgccttttttattgctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201465 True 335 lncRNA 0.45 1 14267388 14267722

Neighbor

gene id symbol gene type direction distance location
AMCG00001738 NA coding upstream 4604 14225469 ~ 14262784 (+)
AMCG00001742 NA coding upstream 47586 14208042 ~ 14219802 (+)
AMCG00001739 dst coding upstream 63615 14079768 ~ 14203773 (+)
AMCG00001737 NA coding upstream 188807 14069744 ~ 14078581 (+)
AMCG00001725 rab23 coding upstream 209810 14042918 ~ 14057578 (+)
AMCG00001741 NA coding downstream 3631 14271353 ~ 14272191 (+)
AMCG00001745 NA coding downstream 5370 14273092 ~ 14274080 (+)
AMCG00001736 bmp5,LOC106612672,LOC106589803 coding downstream 17540 14285262 ~ 14304746 (+)
AMCG00001740 NA coding downstream 52764 14320486 ~ 14337875 (+)
AMCG00001746 klhl31,LOC107688788 coding downstream 205954 14473676 ~ 14482309 (+)
G159798 NA non-coding upstream 1390702 12785795 ~ 12876686 (+)
G159800 NA non-coding upstream 1456653 12799509 ~ 12810735 (+)
G159775 LOC102207824,LOC102800191,LOC107693914 non-coding upstream 1587899 12676811 ~ 12679489 (+)
G159594 NA non-coding upstream 2619936 11625671 ~ 11647452 (+)
G159483 NA non-coding upstream 2827776 11436662 ~ 11439612 (+)
G160036 NA non-coding downstream 38303 14306025 ~ 14306260 (+)
G160107 NA non-coding downstream 258015 14525737 ~ 14526508 (+)
G160116 NA non-coding downstream 291044 14558766 ~ 14563369 (+)
G160129 NA non-coding downstream 361581 14629303 ~ 14632490 (+)
G160144 NA non-coding downstream 433412 14701134 ~ 14701456 (+)
AMCG00001691 NA other upstream 1933688 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 3509530 10747489 ~ 10757858 (+)
AMCG00001643 spred2 other upstream 3589534 10655187 ~ 10677854 (+)
AMCG00001630 NA other upstream 4107562 10157734 ~ 10159826 (+)
G159174 NA other upstream 4352724 9913308 ~ 9914664 (+)
G160026 NA other downstream 1893 14269615 ~ 14270190 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other downstream 1063898 15331620 ~ 15334580 (+)
AMCG00001762 NA other downstream 1164615 15432337 ~ 15439031 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 1969540 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 2911872 17179594 ~ 17182601 (+)

Expression


Co-expression Network