G160036


Basic Information

Item Value
gene id G160036
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14306025 ~ 14306260 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU201478
CATTCCTGTCATTACTTATTTCAAGGAGCTTTACAAGAGGGTGCTGTAAGATCGTTACATTTCTCCTGCAAAACTACTTCCTGTTGATAATGTCAGCCTCTGTTCCATCTACCGAGATGTTTAGGTTTTCCCTTTTCTTGGTCTAATGATTCAATCTGTTCATCAATTACCCCTCCTTCTCATACTGGTGCCCTTTTAGGCCTTGagctatgtttttgtttctatttcttGTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201478 True 236 lncRNA 0.40 1 14306025 14306260

Neighbor

gene id symbol gene type direction distance location
AMCG00001736 bmp5,LOC106612672,LOC106589803 coding upstream 1279 14285262 ~ 14304746 (+)
AMCG00001745 NA coding upstream 31945 14273092 ~ 14274080 (+)
AMCG00001741 NA coding upstream 33834 14271353 ~ 14272191 (+)
AMCG00001738 NA coding upstream 43241 14225469 ~ 14262784 (+)
AMCG00001742 NA coding upstream 86223 14208042 ~ 14219802 (+)
AMCG00001740 NA coding downstream 14226 14320486 ~ 14337875 (+)
AMCG00001746 klhl31,LOC107688788 coding downstream 167416 14473676 ~ 14482309 (+)
AMCG00001748 gclc,LOC107712340 coding downstream 176505 14482765 ~ 14494689 (+)
AMCG00001751 LOC107664697,LOC107712343,LOC107597698 coding downstream 190707 14496967 ~ 14518085 (+)
AMCG00001747 NA coding downstream 213780 14520040 ~ 14524268 (+)
G160024 NA non-coding upstream 38303 14267388 ~ 14267722 (+)
G159798 NA non-coding upstream 1429339 12785795 ~ 12876686 (+)
G159800 NA non-coding upstream 1495290 12799509 ~ 12810735 (+)
G159775 LOC102207824,LOC102800191,LOC107693914 non-coding upstream 1626536 12676811 ~ 12679489 (+)
G159594 NA non-coding upstream 2658573 11625671 ~ 11647452 (+)
G160107 NA non-coding downstream 219477 14525737 ~ 14526508 (+)
G160116 NA non-coding downstream 252506 14558766 ~ 14563369 (+)
G160129 NA non-coding downstream 323043 14629303 ~ 14632490 (+)
G160144 NA non-coding downstream 394874 14701134 ~ 14701456 (+)
G160200 NA non-coding downstream 1096025 15402285 ~ 15417554 (+)
G160026 NA other upstream 35835 14269615 ~ 14270190 (+)
AMCG00001691 NA other upstream 1972325 12329979 ~ 12333700 (+)
AMCG00001645 NA other upstream 3548167 10747489 ~ 10757858 (+)
AMCG00001643 spred2 other upstream 3628171 10655187 ~ 10677854 (+)
AMCG00001630 NA other upstream 4146199 10157734 ~ 10159826 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other downstream 1025360 15331620 ~ 15334580 (+)
AMCG00001762 NA other downstream 1126077 15432337 ~ 15439031 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other downstream 1931002 16237262 ~ 16377860 (+)
AMCG00001841 NA other downstream 2873334 17179594 ~ 17182601 (+)
AMCG00001846 NA other downstream 3111091 17417351 ~ 17462934 (+)

Expression


Co-expression Network