G160094


Basic Information

Item Value
gene id G160094
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14491898 ~ 14493649 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU201543
CCTGAAGCTCTTTTCTTGATCAGTTTAAGATAATTTAATATGGTGCAACGCGTTTCCACGTCCACTTCCATGTTTTCCAGATAACAGTTCAGGATTGGTATTAGTCCTTGAAACACACCTtcctaaaaacacaaaacatgcacTTGTAATGAATCAATATTCTTTCCCCATCATGAAAATGAAACGAGATGGAAAGTGATTGGATGAACAAGTGAAGTAAACCTACCTTCCCATTTATAATCGTGTCAATGCTCATTAACACATATTCCTCTGTGTCGTTTTCCATGCCATTCTGGGTTGCAGCAGATCCATCCGCTACAGGATTACAGCCTTTTAAAAATGTCCTTCCGGAAATAAAACATGCCCTCATGCACCGCATTTCGTTTCTGAGCAACTTTCATGTTTTCATCCACCTAatggaataaaacaatataatattgaGATTCGACATTTCTAGTTAATCCTTGCAAATTGTAAAGAGGACATACCTTTTACCTCATATCACAGAACTCTTAAAAACTATCAAATCAAAATCATCAAGTCTCATCATCAGTTGTGAAGAATTCCCTAATGACAGTAATTGGTCAGAATGAACAATAATGTGCTTCTAATCAAGCCACATTACTCCACATGGTGCATAAATCAATACACTAACATTTCATAGAAGTCACACCACATATCTGCATGtctccctcacacacaaacGACCCACATCTCGACTATTCATGGCTCAACTGCACTAATGAATTATTGACATTTCTCCTACCTTCGACAATGGGATGAGAAAGTCTAACTTGTACGAAAGAATCACTCTAGTGAGCAAAACGACAAACACAACGTATGCAGAGTTTTCAAAGTCCGTCAGCTGTACCTGGATGGGAGAAGCAAACgcaaaagaaaaatagagcagaatattacaaataaatagttttacaaATTGCTTAGACAAATTAATCCTCAAAAAAGacaatgtatgcagtttaagaTGCTTTTATTCACAAATATCCCTAAGAAGCTATTGTTGAACATATACAAGACAATTTCCTCCTTAGCAAATTCCTCTTTATTGCTCCTGCTGCATTATATACCATTGTGCTTACCTCCATTGGACGAAATTCTACTCTCCAGCCAATATCTGAGTTGGGCGGAGGTGGTTTGAACCTCATAGTCTGCCAGTTGGTTGACTGAATGTTCTAGAAAAGTTTGAGAGAAGTGTAAACGAAAAAAACGCACACAAACAACGATGTCACGTGAAAACACATGCAGATTTATATTACCTTCCTTATCCACCTGTCAACAGAAACCGTGTCCATTTACAGGTATGAAAACATGCTTTCAAAGAGTTTCAAAGAGAACGAGAGATGATAAAGACATGCAGCCTAGATCTGCGGAACAGTCATACCTCAAAGTGATCAGATTCATTCTCGTCATCCATGTGGATCTTCTCTTCAAAAAGAGTCAAAGGGTCGCGGATAAAGAGATGGGCTATGTGCTGTGCCAGGAGTTTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201543 True 1511 lncRNA 0.38 2 14491898 14493649

Neighbor

gene id symbol gene type direction distance location
AMCG00001734 lrrc1 coding downstream 30843 14435306 ~ 14461055 (-)
AMCG00001735 NA coding downstream 60556 14425275 ~ 14431342 (-)
AMCG00001732 NA coding downstream 70408 14398535 ~ 14421490 (-)
AMCG00001731 NA coding downstream 111221 14365447 ~ 14380677 (-)
AMCG00001743 hcrtr2,LOC107699124,LOC107597943 coding downstream 132319 14348093 ~ 14359579 (-)
AMCG00001752 fbx9,fbxo9 coding upstream 32860 14526509 ~ 14533785 (-)
AMCG00001754 agpat5,LOC107665182,LOC102777099,LOC107717842 coding upstream 80164 14573813 ~ 14598148 (-)
AMCG00001755 mcph1 coding upstream 130151 14623800 ~ 14637738 (-)
AMCG00001765 NA coding upstream 736723 15230372 ~ 15258616 (-)
AMCG00001763 NA coding upstream 842372 15336021 ~ 15359019 (-)
G160085 NA non-coding downstream 11539 14474242 ~ 14480359 (-)
G160040 NA non-coding downstream 175755 14311141 ~ 14316143 (-)
G160025 NA non-coding downstream 224157 14267387 ~ 14267741 (-)
G159995 NA non-coding downstream 288130 14175741 ~ 14203768 (-)
G159904 NA non-coding downstream 740809 13750880 ~ 13751089 (-)
G160132 NA non-coding upstream 65503 14559152 ~ 14563505 (-)
G160311 NA non-coding upstream 1100958 15594607 ~ 15595355 (-)
G160319 NA non-coding upstream 1110194 15603843 ~ 15610716 (-)
G160387 fbxo28,LOC106576958 non-coding upstream 1298347 15791996 ~ 15796358 (-)
G160538 NA non-coding upstream 1740766 16234415 ~ 16235803 (-)
AMCG00001733 NA other downstream 18739 14463730 ~ 14473159 (-)
G159976 NA other downstream 340343 14147628 ~ 14151555 (-)
AMCG00001710 NA other downstream 1386474 12995637 ~ 13105424 (-)
AMCG00001704 fam135a,LOC107601029,LOC107747270,LOC107665594 other downstream 1514872 12942361 ~ 12977026 (-)
AMCG00001702 NA other downstream 1554655 12931231 ~ 12937243 (-)
AMCG00001756 NA other upstream 57040 14550689 ~ 14570927 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other upstream 1005904 15499553 ~ 15501793 (-)
G160255 NA other upstream 1010662 15504311 ~ 15520639 (-)
AMCG00001784 NA other upstream 1197920 15691569 ~ 15702500 (-)
AMCG00001791 fam98a other upstream 1335109 15828758 ~ 15833806 (-)

Expression


Co-expression Network