Gene
RNA
| Item | Value |
|---|---|
| gene id | G160463 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 16114344 ~ 16114699 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU202021 | True | 356 | lncRNA | 0.51 | 1 | 16114344 | 16114699 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001797 | NA | coding | upstream | 53928 | 16054523 ~ 16060416 (+) |
| AMCG00001785 | degs1 | coding | upstream | 310663 | 15798933 ~ 15803681 (+) |
| AMCG00001786 | fbxo28,LOC106606749 | coding | upstream | 317909 | 15788706 ~ 15796435 (+) |
| AMCG00001787 | rpac1,polr1c,LOC106576959 | coding | upstream | 325906 | 15784945 ~ 15788438 (+) |
| AMCG00001782 | lrrc73,LOC106605838 | coding | upstream | 338842 | 15773679 ~ 15775502 (+) |
| AMCG00001806 | LOC107744706,LOC107081139 | coding | downstream | 8341 | 16123040 ~ 16130281 (+) |
| AMCG00001805 | NA | coding | downstream | 17986 | 16132685 ~ 16146802 (+) |
| AMCG00001807 | NA | coding | downstream | 45845 | 16160544 ~ 16167624 (+) |
| AMCG00001800 | LOC105010553 | coding | downstream | 84449 | 16199148 ~ 16222274 (+) |
| AMCG00001799 | mtr | coding | downstream | 108045 | 16222744 ~ 16236002 (+) |
| G160375 | NA | non-coding | upstream | 284578 | 15828776 ~ 15829766 (+) |
| G160200 | NA | non-coding | upstream | 696790 | 15402285 ~ 15417554 (+) |
| G160144 | NA | non-coding | upstream | 1412888 | 14701134 ~ 14701456 (+) |
| G160129 | NA | non-coding | upstream | 1481854 | 14629303 ~ 14632490 (+) |
| G160116 | NA | non-coding | upstream | 1550975 | 14558766 ~ 14563369 (+) |
| G160464 | NA | non-coding | downstream | 2506 | 16117205 ~ 16119266 (+) |
| G160542 | tubb4b,LOC106575097,LOC105893757 | non-coding | downstream | 162107 | 16276806 ~ 16278054 (+) |
| G160648 | NA | non-coding | downstream | 785196 | 16899895 ~ 16902440 (+) |
| G160649 | NA | non-coding | downstream | 790550 | 16905249 ~ 16910033 (+) |
| G160782 | NA | non-coding | downstream | 1293558 | 17408257 ~ 17408616 (+) |
| AMCG00001762 | NA | other | upstream | 675313 | 15432337 ~ 15439031 (+) |
| AMCG00001760 | mpc1,LOC107725004,LOC106589821,LOC107693783 | other | upstream | 779764 | 15331620 ~ 15334580 (+) |
| G160026 | NA | other | upstream | 1844154 | 14269615 ~ 14270190 (+) |
| AMCG00001691 | NA | other | upstream | 3780644 | 12329979 ~ 12333700 (+) |
| AMCG00001645 | NA | other | upstream | 5356486 | 10747489 ~ 10757858 (+) |
| AMCG00001814 | ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 | other | downstream | 122563 | 16237262 ~ 16377860 (+) |
| AMCG00001841 | NA | other | downstream | 1064895 | 17179594 ~ 17182601 (+) |
| AMCG00001846 | NA | other | downstream | 1302652 | 17417351 ~ 17462934 (+) |
| AMCG00001881 | NA | other | downstream | 2073203 | 18187902 ~ 18209391 (+) |
| AMCG00001883 | NA | other | downstream | 2095310 | 18210009 ~ 18217138 (+) |
