G160649


Basic Information

Item Value
gene id G160649
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16905249 ~ 16910033 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU202248
ggagaagggagaggTACCTGTGAGGGGCAGCGCGCTGCGGTTCCCAGCCATGGCTCTGCTCGGATGCACCAGGTGAAGCCAATGCTGCAGCGGACAGGTTCAGCgctttctcctcctctctgccgCTCCCAGAGCTGTCAACTATGAGACACCAGTGGGGACGAATAGTTCTAAAAACGTCTGTCAAATAATGTCCAAATCCTTTTAATTCAATGCGCCTCGGCTTCTCCCGCCCGACTGAAGCCCCTCTGCCTCCACAGTCCCAGGACAAGTGATTGATCAGAGACGGGACACAGGCTGCAGACAAATGGGATCTCAGCTCGTCACTCACAAgtccgCGGTGTGTACTTCATGTTTGCCGGCATTGCGTGCGCTGCTGTCCGGAGATTGATCATCTGTTAATCTAAATTCAACGTGAAAGGGACAATAGTTTTGCAACAATAAATCAGCGCGTCACGATCTACGGAGGTCTGGATAAGCATCTCTACACCAAACGAGAGCTTCTCTTCTCCAGCGCGCCGGGGTGGACGCGACGGATCGCCTGTCCAGATTAGAGAAGCTCTACCTCCTCAGCAGGAAGACGCGACTGTTATTTTGGGTGCTTTTGATTTGAGGTGGGAGCGAGGCACAGATGAAAGAGCCCAAACCGGATCTACCTGTTACTGATGTCCCTTTGAGTTTCTGTAGAGCTTCGGGGATGGCGGCGCTTGCACGCAATGCCTGGGCTGCAGGCGCGATGACGCAGATCAGCGCCGGGCGGGGGGTCCCTACACCGAGGGGGTCCATCACTGCGCCCCCGGGTGTGCCAGCCGTCCTCCTCCAATGCAACGCTGTGAAGTCTAGGCATTGTGATGCTAGTGGTTGGTAATGATTTGAACAACGCCTGCATGCATGAATGAGTGCCATCTTCTTATGAATGAGAAACGCCAGCTCTTTTAAAACCGGTGTGGTCGGATACACGCCTTCAAGGAACagtgtttatgcattttatagAAACAATAAAAGCATATGCATTGCACAGTCCATGTCTTCGATACAATAGGGTTTTATAATGTGCACTAATTTACATCATAATGCGTAACTGTGTCACAACTAGAGATACGTCCCACACAATATCCTCCATCTATCCAGGAGGTGTGCTTCATCTCAAGTGCAATCCCTACAATAGGCTGTCGGaggtgtgcatgtctgtgtgcagATGGAGAGGAGGTCTCACCCAACAATTATAGCTCTCATACACACGCAAGAGCACCTCGGAGGACTTTAAACCTCAACTAATCTGCTACTGGAACAACAACATGACTGTAAAAGTTCAAATTACTGGGTAAAATACGTCCTTGTACATGAACTACCACACGGTTGCATGTGCAGGAATAAACTTCGTCTCATAATGTCGGGGTTTTAGTTGAACCATTCTgatcatgcttttatttcatgTGGGATTATGTTCGCCTTCTCTATTGCTTGTAAATGGTCAAACCTCGtgcttattaaaaaatgatataaaatgtttgttctgtCCTGACAATAACACGTTTAAACTGCCGGTCCCTGGAAGCATTACGTCTCATGTAACTTATTACagcaactgaaaataataaaaccgtaaaataaaaatccttagCACTTCCAGGTTTCTGTCACTAGGGGGAGATGATGCACGATGTTGAGTATGAATTTAACTTTGATATTGTAATTGGTAATATAAtaagtatttattgatttactttggGTTTACAGTTC

Function

NR:

description
PREDICTED: myosin-7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202248 True 1743 lncRNA 0.47 4 16905249 16910033

Neighbor

gene id symbol gene type direction distance location
AMCG00001820 NA coding upstream 7441 16870396 ~ 16897808 (+)
AMCG00001824 NA coding upstream 35930 16865490 ~ 16869319 (+)
AMCG00001825 NA coding upstream 83423 16816976 ~ 16821826 (+)
AMCG00001815 LOC106911852 coding upstream 135090 16762446 ~ 16770159 (+)
AMCG00001811 fmn2,LOC108413081 coding upstream 270234 16605907 ~ 16635015 (+)
AMCG00001818 NA coding downstream 36491 16946524 ~ 16951511 (+)
AMCG00001819 NA coding downstream 59787 16969820 ~ 16976960 (+)
AMCG00001830 fbln7,LOC106589727 coding downstream 85622 16995655 ~ 17008469 (+)
AMCG00001831 sft2d1 coding downstream 145448 17055481 ~ 17066501 (+)
AMCG00001836 NA coding downstream 159849 17069882 ~ 17070658 (+)
G160648 NA non-coding upstream 2809 16899895 ~ 16902440 (+)
G160542 tubb4b,LOC106575097,LOC105893757 non-coding upstream 627195 16276806 ~ 16278054 (+)
G160464 NA non-coding upstream 785983 16117205 ~ 16119266 (+)
G160463 NA non-coding upstream 790550 16114344 ~ 16114699 (+)
G160375 NA non-coding upstream 1075483 15828776 ~ 15829766 (+)
G160782 NA non-coding downstream 498224 17408257 ~ 17408616 (+)
G160869 NA non-coding downstream 888166 17798199 ~ 17804178 (+)
G160895 NA non-coding downstream 950129 17860162 ~ 17861427 (+)
G160910 NA non-coding downstream 1006762 17916795 ~ 17917054 (+)
G160939 NA non-coding downstream 1114163 18024196 ~ 18029816 (+)
AMCG00001814 ryr2,LOC106456445,LOC108410403,LOC106906861,LOC101062804,LOC103129799 other upstream 527389 16237262 ~ 16377860 (+)
AMCG00001762 NA other upstream 1466218 15432337 ~ 15439031 (+)
AMCG00001760 mpc1,LOC107725004,LOC106589821,LOC107693783 other upstream 1570669 15331620 ~ 15334580 (+)
G160026 NA other upstream 2635059 14269615 ~ 14270190 (+)
AMCG00001691 NA other upstream 4571549 12329979 ~ 12333700 (+)
AMCG00001841 NA other downstream 269561 17179594 ~ 17182601 (+)
AMCG00001846 NA other downstream 507318 17417351 ~ 17462934 (+)
AMCG00001881 NA other downstream 1277869 18187902 ~ 18209391 (+)
AMCG00001883 NA other downstream 1299976 18210009 ~ 18217138 (+)
AMCG00001880 NA other downstream 1753962 18663995 ~ 18673815 (+)

Expression


Co-expression Network