G160817


Basic Information

Item Value
gene id G160817
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 17530866 ~ 17531990 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU202450
TTTGAAGTTTATTGTTGTGGGGTGGAttgaacatattttacatttaatattttaataaagaaagaaaaaatacaaattgtcaGATAAACAGCGACAACGTTTTATTGACAAACTGATCTAAGAGATGATCTGAGACACATACGCAAGTATTTATCTAACATATAGCTAGATAAGTGTGTAtgatatgaatacattataataatgtatattctgTGTTGTTACCTGGTATTGCAGTTTATATTCACAGCTTTATTTCAACAAGATTTACAGTGTGTGATGAGTGACACACAGTGGAGTTTAACCCTGACTACAGTCACACAATCTTCGTCAAGCGTGTCTTCAGCTGTGCAGGAATGTAAATAAAGAGGTTTTCCTGATAACACATGTGCAGGTGATTGTCCTGAAGACGTACAGGACATCCTTCCCCCATTTTTCTGGTTTGACACCACTGGTTAAAATATCCATTGCATATCAGTGCAGCTAAATGATCCTGATTATATAATTGCGAAAACACACATCGATATATTTTCTCCCTGAAAATCCACATTGTAATCCTGTAATACAATTCACTACTCTACCTCGACCACTGCAGTCAGAGCAGAACAGGTGCTTTTCACACACGACGAGGAGAACACACACGTCTGTATGCACTCACAAGTTATTCATATTGTTAGAACGTGTCAAAGATTTGTATCgttgtttttgtgctttgtgcGTCAGGGGTCCAGGTGTGGCTCGGCTCCGGCCGGTGTTCAGGTCCCGGGCCGGTGTCCGTTCATCCGAACCAGTGGTCGCCCATGCACTCCCGGTTCCACTCCACGCCGCACAGCCAGCACCACTCGAACCGGCACCGAGCCTGCGGACACGTCATGTGCATACAGCCCCCNNNCTTCTCCACGGGGGCCCGGCAGCGGGGACAGGGCCGGGTTGTGTTCTGGATGGTCTCCCGGGTCGCCCGCTCCCAGCTCGCCTGTCGCGCTGCCTCCTCGTCGGTGACGAAG

Function

GO:

id name namespace
GO:0070546 L-phenylalanine aminotransferase activity molecular_function
GO:0080130 L-phenylalanine molecular_function
GO:0008793 aromatic-amino-acid molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202450 True 1001 TUCP 0.46 2 17530866 17531990

Neighbor

gene id symbol gene type direction distance location
AMCG00001845 LOC107739475,LOC107565601,LOC107728072 coding downstream 297561 17216410 ~ 17233305 (-)
AMCG00001842 LOC106512626 coding downstream 348250 17165832 ~ 17182616 (-)
AMCG00001844 NA coding downstream 376000 17153503 ~ 17154866 (-)
AMCG00001834 NA coding downstream 476822 17043718 ~ 17054044 (-)
AMCG00001835 NA coding downstream 488872 17022848 ~ 17041994 (-)
AMCG00001855 NA coding upstream 41670 17573660 ~ 17580861 (-)
AMCG00001857 NA coding upstream 51467 17583457 ~ 17584485 (-)
AMCG00001864 kcng3,LOC108273984,LOC107756869,LOC107590001,LOC107758134 coding upstream 341553 17873543 ~ 17879017 (-)
AMCG00001869 NA coding upstream 398128 17930118 ~ 17936656 (-)
AMCG00001867 NA coding upstream 406923 17938913 ~ 17946511 (-)
G160783 NA non-coding downstream 122249 17408211 ~ 17408617 (-)
G160682 NA non-coding downstream 554987 16975448 ~ 16975879 (-)
G160640 NA non-coding downstream 675909 16854653 ~ 16854957 (-)
G160631 NA non-coding downstream 713671 16816939 ~ 16817195 (-)
G160548 ryr2,LOC107395022,LOC102799451 non-coding downstream 1215303 16315327 ~ 16315563 (-)
G160842 NA non-coding upstream 70091 17602081 ~ 17604562 (-)
G160903 NA non-coding upstream 334026 17866016 ~ 17866221 (-)
G160928 NA non-coding upstream 383428 17915418 ~ 17915691 (-)
G160944 NA non-coding upstream 506714 18038704 ~ 18039374 (-)
G161030 NA non-coding upstream 730254 18262244 ~ 18346022 (-)
AMCG00001843 NA other downstream 438317 17091353 ~ 17092549 (-)
AMCG00001791 fam98a other downstream 1697060 15828758 ~ 15833806 (-)
AMCG00001784 NA other downstream 1828366 15691569 ~ 15702500 (-)
G160255 NA other downstream 2010227 15504311 ~ 15520639 (-)
AMCG00001771 banf1,LOC105900308,LOC107086546,LOC106536379,LOC106576720 other downstream 2029073 15499553 ~ 15501793 (-)
AMCG00001865 NA other upstream 276028 17808018 ~ 17810097 (-)
AMCG00001863 LOC105006094,LOC104951035,LOC101160874,LOC106578938 other upstream 328149 17860139 ~ 17865379 (-)
G160925 mta3,LOC105904126,LOC106516625,LOC107749351 other upstream 376764 17908754 ~ 17910853 (-)
G161153 NA other upstream 1303792 18835782 ~ 18850884 (-)
AMCG00001945 NA other upstream 2808435 20340425 ~ 20347505 (-)

Expression


Co-expression Network